Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Gm26090-201ENSMUST00000157897 128 ntBASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Gm24076-201ENSMUST00000158179 94 ntBASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Gm43898-201ENSMUST00000204456 424 ntBASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
H2afb1S4R1E0 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.02□□□□□ -2.25
H2afb1S4R1E0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Gm23990-201ENSMUST00000117031 117 ntBASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Gm25599-201ENSMUST00000157816 103 ntBASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Gm22425-201ENSMUST00000158532 138 ntBASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Gm24880-201ENSMUST00000158776 85 ntBASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Gm25069-201ENSMUST00000175238 86 ntBASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Gm26097-201ENSMUST00000179642 93 ntBASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Gm28862-201ENSMUST00000188246 163 ntBASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.01□□□□□ -2.25
H2afb1S4R1E0 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
H2afb1S4R1E0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm26076-201ENSMUST00000104065 105 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Mir1298-201ENSMUST00000116681 98 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm22989-201ENSMUST00000158313 86 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm22699-201ENSMUST00000175376 105 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm16404-201ENSMUST00000177739 468 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm14598-201ENSMUST00000180109 468 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm14625-201ENSMUST00000180231 468 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm37997-201ENSMUST00000193515 267 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm37116-201ENSMUST00000195161 147 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 CT025630.1-201ENSMUST00000227901 172 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm22704-201ENSMUST00000083027 137 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 Gm21940-201ENSMUST00000204940 2278 ntBASIC1□□□□□ -2.25
H2afb1S4R1E0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm26080-201ENSMUST00000104069 131 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm23083-201ENSMUST00000157851 116 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm26089-201ENSMUST00000157898 107 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm23763-201ENSMUST00000158345 60 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm23114-201ENSMUST00000158478 117 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm22139-201ENSMUST00000158747 105 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Mir7063-201ENSMUST00000184158 91 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm45268-201ENSMUST00000210046 370 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm22576-201ENSMUST00000083733 104 ntBASIC0.99□□□□□ -2.25
H2afb1S4R1E0 Gm14568-201ENSMUST00000119321 294 ntBASIC0.98□□□□□ -2.25
H2afb1S4R1E0 Gm16539-201ENSMUST00000160086 327 ntBASIC0.98□□□□□ -2.25
H2afb1S4R1E0 Gm17020-201ENSMUST00000172274 274 ntBASIC0.98□□□□□ -2.25
H2afb1S4R1E0 Gm22914-201ENSMUST00000175195 77 ntBASIC0.98□□□□□ -2.25
H2afb1S4R1E0 Gm24106-201ENSMUST00000175498 127 ntBASIC0.98□□□□□ -2.25
H2afb1S4R1E0 Gm23419-201ENSMUST00000175523 84 ntBASIC0.98□□□□□ -2.25
H2afb1S4R1E0 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.98□□□□□ -2.25
H2afb1S4R1E0 Gm22482-201ENSMUST00000122563 359 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Gm22233-201ENSMUST00000157464 114 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Gm23080-201ENSMUST00000157846 103 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Gm25868-201ENSMUST00000158253 114 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Gm22200-201ENSMUST00000158614 67 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Gm38274-201ENSMUST00000195689 148 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Mir468-201ENSMUST00000197332 78 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Gm25136-201ENSMUST00000083253 115 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Gm25683-201ENSMUST00000083940 131 ntBASIC0.97□□□□□ -2.25
H2afb1S4R1E0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
H2afb1S4R1E0 Gm25882-201ENSMUST00000157784 85 ntBASIC0.96□□□□□ -2.26
H2afb1S4R1E0 Gm25044-201ENSMUST00000158603 104 ntBASIC0.96□□□□□ -2.26
H2afb1S4R1E0 Gm24054-201ENSMUST00000158619 105 ntBASIC0.96□□□□□ -2.26
H2afb1S4R1E0 Gm26029-201ENSMUST00000158659 132 ntBASIC0.96□□□□□ -2.26
H2afb1S4R1E0 Gm16307-201ENSMUST00000161269 210 ntBASIC0.96□□□□□ -2.26
H2afb1S4R1E0 Gm27365-201ENSMUST00000184041 177 ntBASIC0.96□□□□□ -2.26
H2afb1S4R1E0 Gm44462-201ENSMUST00000199696 129 ntBASIC0.96□□□□□ -2.26
H2afb1S4R1E0 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
H2afb1S4R1E0 Gm25838-201ENSMUST00000158920 120 ntBASIC0.95□□□□□ -2.26
H2afb1S4R1E0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.95□□□□□ -2.26
H2afb1S4R1E0 Mir6381-201ENSMUST00000183426 87 ntBASIC0.95□□□□□ -2.26
H2afb1S4R1E0 Gm2077-201ENSMUST00000195017 319 ntBASIC0.95□□□□□ -2.26
H2afb1S4R1E0 Snora41-201ENSMUST00000082668 132 ntBASIC0.95□□□□□ -2.26
H2afb1S4R1E0 Gm25128-201ENSMUST00000083339 76 ntBASIC0.95□□□□□ -2.26
H2afb1S4R1E0 Mir201-201ENSMUST00000083470 66 ntBASIC0.95□□□□□ -2.26
H2afb1S4R1E0 Gm23130-201ENSMUST00000104252 74 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm26420-201ENSMUST00000104273 103 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm22079-201ENSMUST00000157592 106 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm25716-201ENSMUST00000158628 104 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Mir3098-201ENSMUST00000175416 87 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm23289-201ENSMUST00000175615 108 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Mir6377-201ENSMUST00000183760 114 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm27419-201ENSMUST00000184576 109 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm44976-201ENSMUST00000205543 261 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm44948-201ENSMUST00000209050 149 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm22809-201ENSMUST00000082743 156 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.94□□□□□ -2.26
H2afb1S4R1E0 Gm24431-201ENSMUST00000104073 66 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm22780-201ENSMUST00000104084 132 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm24250-201ENSMUST00000157320 135 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm23375-201ENSMUST00000175407 83 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm23770-201ENSMUST00000178009 108 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm22832-201ENSMUST00000178022 108 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm23863-201ENSMUST00000178265 108 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm24828-201ENSMUST00000178507 108 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm23052-201ENSMUST00000178633 108 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm25729-201ENSMUST00000179050 108 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm25359-201ENSMUST00000179315 108 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm22624-201ENSMUST00000179913 108 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm28794-201ENSMUST00000185276 136 ntBASIC0.93□□□□□ -2.26
H2afb1S4R1E0 Gm18665-201ENSMUST00000189783 270 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms