| Reg3d | Q9QUS9 | Mir377-201 | ENSMUST00000083504 | 68 nt | BASIC | -0.04 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | B230307C23Rik-201 | ENSMUST00000113729 | 192 nt | TSL 5 BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm13922-201 | ENSMUST00000119505 | 156 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm13797-201 | ENSMUST00000121792 | 120 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm22077-201 | ENSMUST00000157594 | 93 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Mir100-201 | ENSMUST00000175270 | 80 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm25024-201 | ENSMUST00000179667 | 104 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm28418-201 | ENSMUST00000186179 | 423 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm28767-201 | ENSMUST00000188601 | 114 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm37404-201 | ENSMUST00000195726 | 359 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Snord95-201 | ENSMUST00000082846 | 68 nt | BASIC | -0.05 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm24278-201 | ENSMUST00000104239 | 127 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm25875-201 | ENSMUST00000104323 | 107 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm12797-201 | ENSMUST00000118645 | 273 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm24392-201 | ENSMUST00000158136 | 103 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm24667-201 | ENSMUST00000158938 | 103 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm27993-201 | ENSMUST00000184362 | 85 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm37715-201 | ENSMUST00000193206 | 235 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm38109-201 | ENSMUST00000195386 | 181 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm42506-201 | ENSMUST00000202009 | 150 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Olfr1485-ps1-201 | ENSMUST00000208420 | 370 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm24030-201 | ENSMUST00000083931 | 164 nt | BASIC | -0.06 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm25309-201 | ENSMUST00000116728 | 126 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm13345-201 | ENSMUST00000121928 | 228 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm26402-201 | ENSMUST00000158499 | 113 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm26287-201 | ENSMUST00000158887 | 81 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm24321-201 | ENSMUST00000175348 | 80 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Mir3105-201 | ENSMUST00000175480 | 85 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm24218-201 | ENSMUST00000180163 | 105 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm28008-201 | ENSMUST00000184021 | 186 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm27943-201 | ENSMUST00000184844 | 116 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm44345-201 | ENSMUST00000199560 | 135 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm44455-201 | ENSMUST00000200061 | 82 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | AC136457.1-201 | ENSMUST00000224195 | 156 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm22571-201 | ENSMUST00000082984 | 70 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm25894-201 | ENSMUST00000083458 | 75 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Mir411-201 | ENSMUST00000083543 | 82 nt | BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Cdh4-202 | ENSMUST00000098996 | 69 nt | TSL 5 BASIC | -0.07 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm25718-201 | ENSMUST00000158632 | 118 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm23917-201 | ENSMUST00000175256 | 98 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm24575-201 | ENSMUST00000175502 | 77 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Mir6369-201 | ENSMUST00000183772 | 106 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Mir7077-201 | ENSMUST00000183991 | 57 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm29235-201 | ENSMUST00000185786 | 442 nt | TSL 5 BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm38208-201 | ENSMUST00000192476 | 114 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm45005-201 | ENSMUST00000206640 | 157 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm31450-201 | ENSMUST00000220668 | 132 nt | TSL 2 BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm22686-201 | ENSMUST00000082847 | 100 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Snord82-201 | ENSMUST00000082889 | 70 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm26497-201 | ENSMUST00000083146 | 107 nt | BASIC | -0.08 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm12924-201 | ENSMUST00000121747 | 318 nt | BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Mir1899-201 | ENSMUST00000122798 | 96 nt | BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm25771-201 | ENSMUST00000158565 | 144 nt | BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm10548-202 | ENSMUST00000165672 | 272 nt | BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm23002-201 | ENSMUST00000179221 | 107 nt | BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Mir7014-201 | ENSMUST00000183853 | 63 nt | BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Mir721-201 | ENSMUST00000200230 | 88 nt | BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Sva-201 | ENSMUST00000024059 | 651 nt | APPRIS P2 TSL 1 (best) BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Snord60-201 | ENSMUST00000082834 | 78 nt | BASIC | -0.09 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm14327-202 | ENSMUST00000108935 | 1451 nt | APPRIS P1 TSL 1 (best) BASIC | -0.1 | □□□□□ -2.42 | | |
| Reg3d | Q9QUS9 | Gm22784-201 | ENSMUST00000104088 | 132 nt | BASIC | -0.1 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm22999-201 | ENSMUST00000157082 | 88 nt | BASIC | -0.1 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Mir5624-201 | ENSMUST00000176635 | 61 nt | BASIC | -0.1 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm42594-201 | ENSMUST00000199511 | 246 nt | BASIC | -0.1 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Mir7227-201 | ENSMUST00000200408 | 59 nt | BASIC | -0.1 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm23301-201 | ENSMUST00000082713 | 65 nt | BASIC | -0.1 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm26293-201 | ENSMUST00000104170 | 84 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm25170-201 | ENSMUST00000104191 | 129 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm22673-201 | ENSMUST00000104415 | 131 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm23881-201 | ENSMUST00000116872 | 66 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm22051-201 | ENSMUST00000117002 | 127 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm25664-201 | ENSMUST00000157697 | 107 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm26194-201 | ENSMUST00000175036 | 71 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Mir669k-201 | ENSMUST00000177742 | 127 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm24488-201 | ENSMUST00000179934 | 127 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm25673-201 | ENSMUST00000179957 | 127 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm25701-201 | ENSMUST00000179988 | 127 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm26431-201 | ENSMUST00000180199 | 127 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Sprr2h-202 | ENSMUST00000191886 | 297 nt | TSL 1 (best) BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Mir3967-201 | ENSMUST00000198710 | 68 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm44328-201 | ENSMUST00000199331 | 75 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm44468-201 | ENSMUST00000199516 | 105 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | AC192333.1-201 | ENSMUST00000224573 | 376 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Mirlet7g-201 | ENSMUST00000083506 | 88 nt | BASIC | -0.11 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm24423-201 | ENSMUST00000101982 | 106 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm15030-201 | ENSMUST00000119804 | 484 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm23655-201 | ENSMUST00000122627 | 105 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm23219-201 | ENSMUST00000158123 | 87 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm23410-201 | ENSMUST00000179967 | 107 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm23186-201 | ENSMUST00000180078 | 107 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm27672-201 | ENSMUST00000183751 | 204 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm27668-201 | ENSMUST00000184188 | 120 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm38364-201 | ENSMUST00000191814 | 179 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm22505-201 | ENSMUST00000082956 | 108 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm22363-201 | ENSMUST00000083100 | 108 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm23814-201 | ENSMUST00000083230 | 102 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm24929-201 | ENSMUST00000083403 | 139 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Mir218-1-201 | ENSMUST00000083669 | 110 nt | BASIC | -0.12 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Gm24867-201 | ENSMUST00000104161 | 107 nt | BASIC | -0.13 | □□□□□ -2.43 | | |
| Reg3d | Q9QUS9 | Scarna9-201 | ENSMUST00000104318 | 70 nt | BASIC | -0.13 | □□□□□ -2.43 | | |