Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm24468-201ENSMUST00000104489 104 ntBASIC1.95□□□□□ -2.1
Ldb3Q9JKS4 Gm12309-201ENSMUST00000119889 182 ntBASIC1.95□□□□□ -2.1
Ldb3Q9JKS4 Gm22638-201ENSMUST00000179674 107 ntBASIC1.95□□□□□ -2.1
Ldb3Q9JKS4 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.95□□□□□ -2.1
Ldb3Q9JKS4 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.95□□□□□ -2.1
Ldb3Q9JKS4 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.95□□□□□ -2.1
Ldb3Q9JKS4 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Ldb3Q9JKS4 Gm22159-201ENSMUST00000158412 130 ntBASIC1.94□□□□□ -2.1
Ldb3Q9JKS4 Gm23817-201ENSMUST00000158449 104 ntBASIC1.94□□□□□ -2.1
Ldb3Q9JKS4 Mir6917-201ENSMUST00000184111 61 ntBASIC1.94□□□□□ -2.1
Ldb3Q9JKS4 Gm45471-201ENSMUST00000211270 281 ntBASIC1.94□□□□□ -2.1
Ldb3Q9JKS4 Gm25796-201ENSMUST00000082645 163 ntBASIC1.94□□□□□ -2.1
Ldb3Q9JKS4 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Ldb3Q9JKS4 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.94□□□□□ -2.1
Ldb3Q9JKS4 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
Ldb3Q9JKS4 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm26342-201ENSMUST00000104557 129 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm11856-201ENSMUST00000118712 276 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm11792-201ENSMUST00000120640 168 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm24237-201ENSMUST00000157790 132 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm23083-201ENSMUST00000157851 116 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm20409-201ENSMUST00000173457 130 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm23963-201ENSMUST00000179603 77 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Mir6377-201ENSMUST00000183760 114 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm23244-201ENSMUST00000083375 92 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Mir411-201ENSMUST00000083543 82 ntBASIC1.93□□□□□ -2.1
Ldb3Q9JKS4 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.92□□□□□ -2.1
Ldb3Q9JKS4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Ldb3Q9JKS4 Mir344e-201ENSMUST00000104677 66 ntBASIC1.92□□□□□ -2.1
Ldb3Q9JKS4 Mir7068-201ENSMUST00000183439 74 ntBASIC1.92□□□□□ -2.1
Ldb3Q9JKS4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.92□□□□□ -2.1
Ldb3Q9JKS4 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.92□□□□□ -2.1
Ldb3Q9JKS4 Snora69-201ENSMUST00000083708 131 ntBASIC1.92□□□□□ -2.1
Ldb3Q9JKS4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ldb3Q9JKS4 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm25094-201ENSMUST00000103992 131 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm25090-201ENSMUST00000104000 132 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm22772-201ENSMUST00000104451 121 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Mir880-201ENSMUST00000104809 78 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm14674-201ENSMUST00000117816 342 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm25978-201ENSMUST00000158698 90 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Mir3092-201ENSMUST00000174954 96 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm22950-201ENSMUST00000082776 107 ntBASIC1.91□□□□□ -2.1
Ldb3Q9JKS4 Gm23652-201ENSMUST00000116752 107 ntBASIC1.9□□□□□ -2.11
Ldb3Q9JKS4 Gm26253-201ENSMUST00000122493 103 ntBASIC1.9□□□□□ -2.11
Ldb3Q9JKS4 Gm26090-201ENSMUST00000157897 128 ntBASIC1.9□□□□□ -2.11
Ldb3Q9JKS4 Gm25642-201ENSMUST00000175137 66 ntBASIC1.9□□□□□ -2.11
Ldb3Q9JKS4 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.9□□□□□ -2.11
Ldb3Q9JKS4 Trbv7-201ENSMUST00000193339 402 ntBASIC1.9□□□□□ -2.11
Ldb3Q9JKS4 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.9□□□□□ -2.11
Ldb3Q9JKS4 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ldb3Q9JKS4 Gm25750-201ENSMUST00000175483 112 ntBASIC1.89□□□□□ -2.11
Ldb3Q9JKS4 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.89□□□□□ -2.11
Ldb3Q9JKS4 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.89□□□□□ -2.11
Ldb3Q9JKS4 Snora41-201ENSMUST00000082668 132 ntBASIC1.89□□□□□ -2.11
Ldb3Q9JKS4 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.89□□□□□ -2.11
Ldb3Q9JKS4 Mir423-201ENSMUST00000083584 109 ntBASIC1.89□□□□□ -2.11
Ldb3Q9JKS4 Gm24698-201ENSMUST00000083883 130 ntBASIC1.89□□□□□ -2.11
Ldb3Q9JKS4 Mir451a-201ENSMUST00000093557 72 ntBASIC1.89□□□□□ -2.11
Ldb3Q9JKS4 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Gm22999-201ENSMUST00000157082 88 ntBASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Gm26104-201ENSMUST00000157250 108 ntBASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Mir5118-201ENSMUST00000175551 67 ntBASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Gm45268-201ENSMUST00000210046 370 ntBASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Mir300-201ENSMUST00000083485 79 ntBASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Gm22154-201ENSMUST00000083844 131 ntBASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Ldb3Q9JKS4 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Snord78-201ENSMUST00000104032 66 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm23551-201ENSMUST00000116852 121 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm12941-201ENSMUST00000117934 220 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm24238-201ENSMUST00000157792 98 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm23342-201ENSMUST00000158958 115 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm20391-201ENSMUST00000174722 106 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm42795-201ENSMUST00000198847 76 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm44320-201ENSMUST00000199276 86 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Ldb3Q9JKS4 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Gm26154-201ENSMUST00000102339 96 ntBASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Mir7016-201ENSMUST00000184308 72 ntBASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Mir6419-201ENSMUST00000184784 113 ntBASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Gm27979-201ENSMUST00000185126 56 ntBASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Gm24412-201ENSMUST00000083426 109 ntBASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Gm23038-201ENSMUST00000083873 104 ntBASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.86□□□□□ -2.11
Ldb3Q9JKS4 Gm24098-201ENSMUST00000102075 109 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms