Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 AC164297.5-201ENSMUST00000224365 198 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.64□□□□□ -2.51
Trem3Q9JKE1 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 AC116589.1-201ENSMUST00000220634 327 ntBASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.65□□□□□ -2.51
Trem3Q9JKE1 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Snord60-201ENSMUST00000082834 78 ntBASIC-0.66□□□□□ -2.52
Trem3Q9JKE1 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 Mir183-201ENSMUST00000083685 70 ntBASIC-0.67□□□□□ -2.52
Trem3Q9JKE1 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.68□□□□□ -2.52
Trem3Q9JKE1 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Snora19-201ENSMUST00000082962 132 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.69□□□□□ -2.52
Trem3Q9JKE1 Gm24499-201ENSMUST00000158446 104 ntBASIC-0.7□□□□□ -2.52
Trem3Q9JKE1 Cfap61-214ENSMUST00000167179 183 ntBASIC-0.7□□□□□ -2.52
Trem3Q9JKE1 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.7□□□□□ -2.52
Trem3Q9JKE1 Mir327-201ENSMUST00000199328 69 ntBASIC-0.7□□□□□ -2.52
Trem3Q9JKE1 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.7□□□□□ -2.52
Trem3Q9JKE1 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.7□□□□□ -2.52
Trem3Q9JKE1 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.7□□□□□ -2.52
Trem3Q9JKE1 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.7□□□□□ -2.52
Trem3Q9JKE1 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.71□□□□□ -2.52
Trem3Q9JKE1 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.71□□□□□ -2.52
Trem3Q9JKE1 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.72□□□□□ -2.52
Trem3Q9JKE1 Gm25052-201ENSMUST00000122661 158 ntBASIC-0.72□□□□□ -2.52
Trem3Q9JKE1 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.72□□□□□ -2.52
Trem3Q9JKE1 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.72□□□□□ -2.52
Trem3Q9JKE1 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.72□□□□□ -2.52
Trem3Q9JKE1 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.73□□□□□ -2.53
Trem3Q9JKE1 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.73□□□□□ -2.53
Trem3Q9JKE1 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.73□□□□□ -2.53
Trem3Q9JKE1 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.73□□□□□ -2.53
Trem3Q9JKE1 AC125311.1-201ENSMUST00000226950 220 ntBASIC-0.73□□□□□ -2.53
Trem3Q9JKE1 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.73□□□□□ -2.53
Trem3Q9JKE1 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.74□□□□□ -2.53
Trem3Q9JKE1 Gm16356-201ENSMUST00000143300 169 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms