Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC159093.2-201ENSMUST00000227881 297 ntBASIC3.15□□□□□ -1.91
Ube3bQ9ES34 Mir410-201ENSMUST00000083563 81 ntBASIC3.15□□□□□ -1.91
Ube3bQ9ES34 Mir301-201ENSMUST00000083655 86 ntBASIC3.15□□□□□ -1.91
Ube3bQ9ES34 Mir490-201ENSMUST00000093567 84 ntBASIC3.15□□□□□ -1.91
Ube3bQ9ES34 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ube3bQ9ES34 Gm23390-201ENSMUST00000157393 106 ntBASIC3.14□□□□□ -1.91
Ube3bQ9ES34 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ube3bQ9ES34 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Ube3bQ9ES34 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ube3bQ9ES34 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.14□□□□□ -1.91
Ube3bQ9ES34 Mir682-201ENSMUST00000102281 96 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Gm24068-201ENSMUST00000104513 132 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Mir3106-201ENSMUST00000175401 82 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Gm28647-201ENSMUST00000188416 197 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Gm19855-201ENSMUST00000210145 249 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 AC158598.2-201ENSMUST00000213397 3832 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Gm25357-201ENSMUST00000082745 72 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Mir5117-201ENSMUST00000083226 84 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Gm44133-202ENSMUST00000204450 2586 ntBASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ube3bQ9ES34 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ube3bQ9ES34 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC3.12□□□□□ -1.91
Ube3bQ9ES34 Gm26411-201ENSMUST00000157668 107 ntBASIC3.12□□□□□ -1.91
Ube3bQ9ES34 Gm22651-201ENSMUST00000157872 94 ntBASIC3.12□□□□□ -1.91
Ube3bQ9ES34 Gm25470-201ENSMUST00000175576 111 ntBASIC3.12□□□□□ -1.91
Ube3bQ9ES34 Gm42807-201ENSMUST00000200141 329 ntBASIC3.12□□□□□ -1.91
Ube3bQ9ES34 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ube3bQ9ES34 Gm22338-201ENSMUST00000157715 129 ntBASIC3.11□□□□□ -1.91
Ube3bQ9ES34 Gm26485-201ENSMUST00000158019 64 ntBASIC3.11□□□□□ -1.91
Ube3bQ9ES34 Gm27330-201ENSMUST00000184689 132 ntBASIC3.11□□□□□ -1.91
Ube3bQ9ES34 Gm37428-201ENSMUST00000193886 137 ntBASIC3.11□□□□□ -1.91
Ube3bQ9ES34 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.11□□□□□ -1.91
Ube3bQ9ES34 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ube3bQ9ES34 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ube3bQ9ES34 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Mir764-201ENSMUST00000103259 108 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Gm24670-201ENSMUST00000104154 132 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Gm24396-201ENSMUST00000116905 93 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Gm22888-201ENSMUST00000158640 77 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Mir3076-201ENSMUST00000175415 60 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Gm45471-201ENSMUST00000211270 281 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Gm22622-201ENSMUST00000082870 129 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Gm23570-201ENSMUST00000083029 104 ntBASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Ube3bQ9ES34 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ube3bQ9ES34 Gm24199-201ENSMUST00000157808 136 ntBASIC3.09□□□□□ -1.91
Ube3bQ9ES34 Gm24656-201ENSMUST00000177548 132 ntBASIC3.09□□□□□ -1.91
Ube3bQ9ES34 Gm45386-201ENSMUST00000210194 218 ntBASIC3.09□□□□□ -1.91
Ube3bQ9ES34 Gm23299-201ENSMUST00000082708 79 ntBASIC3.09□□□□□ -1.91
Ube3bQ9ES34 Gm22743-201ENSMUST00000083445 133 ntBASIC3.09□□□□□ -1.91
Ube3bQ9ES34 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.08□□□□□ -1.92
Ube3bQ9ES34 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ube3bQ9ES34 Gm22674-201ENSMUST00000104413 131 ntBASIC3.08□□□□□ -1.92
Ube3bQ9ES34 Gm11966-201ENSMUST00000119907 87 ntBASIC3.08□□□□□ -1.92
Ube3bQ9ES34 Gm25322-201ENSMUST00000122556 104 ntBASIC3.08□□□□□ -1.92
Ube3bQ9ES34 Gm26004-201ENSMUST00000158804 116 ntBASIC3.08□□□□□ -1.92
Ube3bQ9ES34 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ube3bQ9ES34 Gm23344-201ENSMUST00000083818 68 ntBASIC3.08□□□□□ -1.92
Ube3bQ9ES34 Gm22782-201ENSMUST00000104082 132 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Mir1195-201ENSMUST00000116818 98 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Gm23854-201ENSMUST00000158378 108 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Gm27991-201ENSMUST00000184804 137 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Gm45522-201ENSMUST00000210784 166 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Gm24412-201ENSMUST00000083426 109 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Mir451a-201ENSMUST00000093557 72 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Gm44560-201ENSMUST00000207816 3115 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Gm14405-201ENSMUST00000117808 2330 ntBASIC3.07□□□□□ -1.92
Ube3bQ9ES34 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Gm25611-201ENSMUST00000104017 133 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Gm11253-201ENSMUST00000118486 201 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 n-R5s188-201ENSMUST00000122646 105 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Gm24384-201ENSMUST00000122693 75 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Gm24868-201ENSMUST00000157265 136 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Gm24077-201ENSMUST00000158183 136 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Gm24771-201ENSMUST00000158508 137 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Mir6917-201ENSMUST00000184111 61 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Gm25899-201ENSMUST00000082672 141 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Mir29c-201ENSMUST00000083614 88 ntBASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
Ube3bQ9ES34 Mir880-201ENSMUST00000104809 78 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm16171-201ENSMUST00000118004 324 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm26105-201ENSMUST00000157253 190 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm22732-201ENSMUST00000158093 121 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm22768-201ENSMUST00000158366 153 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm27878-201ENSMUST00000184000 106 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm28900-201ENSMUST00000185232 156 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm19257-201ENSMUST00000186121 183 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 AC164612.2-202ENSMUST00000216314 253 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm25635-201ENSMUST00000082675 131 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.05□□□□□ -1.92
Ube3bQ9ES34 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.04□□□□□ -1.92
Ube3bQ9ES34 Gm23803-201ENSMUST00000104610 132 ntBASIC3.04□□□□□ -1.92
Ube3bQ9ES34 Gm44966-201ENSMUST00000208096 157 ntBASIC3.04□□□□□ -1.92
Ube3bQ9ES34 Gm26494-201ENSMUST00000083154 143 ntBASIC3.04□□□□□ -1.92
Ube3bQ9ES34 Gm24493-201ENSMUST00000083805 143 ntBASIC3.04□□□□□ -1.92
Ube3bQ9ES34 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ube3bQ9ES34 Gm25476-201ENSMUST00000175125 185 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms