Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm12309-201ENSMUST00000119889 182 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm24750-201ENSMUST00000157843 104 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm25771-201ENSMUST00000158565 144 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm25364-201ENSMUST00000158851 107 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm25838-201ENSMUST00000158920 120 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Traj60-201ENSMUST00000167781 54 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Mir6240-201ENSMUST00000184281 117 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Mir7052-201ENSMUST00000184821 65 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm5002-201ENSMUST00000207145 223 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Gm24624-201ENSMUST00000082617 164 ntBASIC1.4□□□□□ -2.19
Trim54Q9ERP3 Mir654-201ENSMUST00000104787 84 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm13345-201ENSMUST00000121928 228 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm23636-201ENSMUST00000175070 95 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm22862-201ENSMUST00000178593 121 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Mir8119-201ENSMUST00000183371 129 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Mir7039-201ENSMUST00000183852 85 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm25401-201ENSMUST00000082975 106 ntBASIC1.39□□□□□ -2.19
Trim54Q9ERP3 Gm24588-201ENSMUST00000116696 83 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Gm23329-201ENSMUST00000157415 108 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Gm26090-201ENSMUST00000157897 128 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Gm25069-201ENSMUST00000175238 86 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Mir211-201ENSMUST00000083651 106 ntBASIC1.38□□□□□ -2.19
Trim54Q9ERP3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm23907-201ENSMUST00000104595 189 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm22200-201ENSMUST00000158614 67 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm24880-201ENSMUST00000158776 85 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm22914-201ENSMUST00000175195 77 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm23567-201ENSMUST00000178005 107 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Gm44922-201ENSMUST00000206690 90 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Mir451a-201ENSMUST00000093557 72 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.37□□□□□ -2.19
Trim54Q9ERP3 Snord72-201ENSMUST00000104549 81 ntBASIC1.36□□□□□ -2.19
Trim54Q9ERP3 Gm22559-201ENSMUST00000157329 134 ntBASIC1.36□□□□□ -2.19
Trim54Q9ERP3 Gm22606-201ENSMUST00000158290 103 ntBASIC1.36□□□□□ -2.19
Trim54Q9ERP3 Gm26029-201ENSMUST00000158659 132 ntBASIC1.36□□□□□ -2.19
Trim54Q9ERP3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm23328-201ENSMUST00000157418 132 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm22946-201ENSMUST00000158558 82 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm16546-201ENSMUST00000159442 355 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm16399-201ENSMUST00000181423 219 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm44358-201ENSMUST00000196301 98 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.35□□□□□ -2.19
Trim54Q9ERP3 Gm11857-201ENSMUST00000119817 324 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Gm22337-201ENSMUST00000157721 132 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Gm22612-201ENSMUST00000158293 101 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Gm23209-201ENSMUST00000158667 110 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.34□□□□□ -2.19
Trim54Q9ERP3 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.34□□□□□ -2.2
Trim54Q9ERP3 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Gm14568-201ENSMUST00000119321 294 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Gm22482-201ENSMUST00000122563 359 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Gm26097-201ENSMUST00000179642 93 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Gm24252-201ENSMUST00000083700 132 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Mir488-201ENSMUST00000093595 109 ntBASIC1.33□□□□□ -2.2
Trim54Q9ERP3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm22999-201ENSMUST00000157082 88 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm16539-201ENSMUST00000160086 327 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm27420-201ENSMUST00000183823 79 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm28256-201ENSMUST00000188953 139 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm28559-201ENSMUST00000190532 139 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.32□□□□□ -2.2
Trim54Q9ERP3 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm26224-201ENSMUST00000082506 80 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Gm26326-201ENSMUST00000083070 129 ntBASIC1.32□□□□□ -2.2
Trim54Q9ERP3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm22673-201ENSMUST00000104415 131 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm26301-201ENSMUST00000104813 95 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm23080-201ENSMUST00000157846 103 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Snora24-201ENSMUST00000174989 130 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Mir6481-201ENSMUST00000184617 110 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm42988-201ENSMUST00000198116 225 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm44490-201ENSMUST00000198566 127 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm25588-201ENSMUST00000082501 140 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Mir196b-201ENSMUST00000083509 85 ntBASIC1.31□□□□□ -2.2
Trim54Q9ERP3 Gm26403-201ENSMUST00000158500 105 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Gm23339-201ENSMUST00000158962 139 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Gm22348-201ENSMUST00000178674 79 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.3□□□□□ -2.2
Trim54Q9ERP3 Gm23772-201ENSMUST00000104433 102 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Mir1298-201ENSMUST00000116681 98 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm25599-201ENSMUST00000157816 103 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm25768-201ENSMUST00000158570 98 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm25976-201ENSMUST00000158695 130 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm27934-201ENSMUST00000158795 63 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm27365-201ENSMUST00000184041 177 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.29□□□□□ -2.2
Trim54Q9ERP3 Gm22003-201ENSMUST00000101885 107 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm25011-201ENSMUST00000158398 126 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm25769-201ENSMUST00000158569 127 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm25044-201ENSMUST00000158603 104 ntBASIC1.28□□□□□ -2.2
Trim54Q9ERP3 Gm22663-201ENSMUST00000158721 102 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 217.7 ms