Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm24559-201ENSMUST00000157519 121 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm25494-201ENSMUST00000158143 100 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Mir5624-201ENSMUST00000176635 61 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm22450-201ENSMUST00000179641 107 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm25473-201ENSMUST00000180191 107 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm24856-201ENSMUST00000082809 107 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm26071-201ENSMUST00000083261 107 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm24521-201ENSMUST00000083958 107 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm24445-201ENSMUST00000083981 107 ntBASIC0.07□□□□□ -2.4
Lima1Q9ERG0 Gm15213-201ENSMUST00000122098 216 ntBASIC0.06□□□□□ -2.4
Lima1Q9ERG0 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.06□□□□□ -2.4
Lima1Q9ERG0 Gm25424-201ENSMUST00000157612 58 ntBASIC0.06□□□□□ -2.4
Lima1Q9ERG0 Gm27402-201ENSMUST00000183890 120 ntBASIC0.06□□□□□ -2.4
Lima1Q9ERG0 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.06□□□□□ -2.4
Lima1Q9ERG0 Gm25142-201ENSMUST00000082698 107 ntBASIC0.06□□□□□ -2.4
Lima1Q9ERG0 Snord95-201ENSMUST00000082846 68 ntBASIC0.06□□□□□ -2.4
Lima1Q9ERG0 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Lima1Q9ERG0 Gm14919-201ENSMUST00000120839 390 ntBASIC0.05□□□□□ -2.4
Lima1Q9ERG0 Mir7010-201ENSMUST00000183464 63 ntBASIC0.05□□□□□ -2.4
Lima1Q9ERG0 Gm45005-201ENSMUST00000206640 157 ntBASIC0.05□□□□□ -2.4
Lima1Q9ERG0 Gm44563-201ENSMUST00000207958 178 ntBASIC0.05□□□□□ -2.4
Lima1Q9ERG0 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.05□□□□□ -2.4
Lima1Q9ERG0 Mir532-201ENSMUST00000093630 96 ntBASIC0.05□□□□□ -2.4
Lima1Q9ERG0 Gm24635-201ENSMUST00000122712 128 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 Mir3089-201ENSMUST00000175350 84 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 Gm38109-201ENSMUST00000195386 181 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 Gm37404-201ENSMUST00000195726 359 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 Mir7229-201ENSMUST00000197062 53 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 Mir382-201ENSMUST00000083494 76 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 Gm22753-201ENSMUST00000083657 107 ntBASIC0.04□□□□□ -2.4
Lima1Q9ERG0 Gm13922-201ENSMUST00000119505 156 ntBASIC0.03□□□□□ -2.4
Lima1Q9ERG0 Gm24728-201ENSMUST00000158226 125 ntBASIC0.03□□□□□ -2.4
Lima1Q9ERG0 Gm22088-201ENSMUST00000158341 117 ntBASIC0.03□□□□□ -2.4
Lima1Q9ERG0 Gm22767-201ENSMUST00000158365 165 ntBASIC0.03□□□□□ -2.4
Lima1Q9ERG0 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.03□□□□□ -2.4
Lima1Q9ERG0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.03□□□□□ -2.4
Lima1Q9ERG0 Gm23655-201ENSMUST00000122627 105 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm25444-201ENSMUST00000158999 113 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm25024-201ENSMUST00000179667 104 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm27607-201ENSMUST00000185162 122 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm38208-201ENSMUST00000192476 114 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Mir6896-201ENSMUST00000198033 73 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm44345-201ENSMUST00000199560 135 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm44858-201ENSMUST00000207360 154 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm26123-201ENSMUST00000083363 135 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Mir200a-201ENSMUST00000083466 90 ntBASIC0.02□□□□□ -2.41
Lima1Q9ERG0 Gm23941-201ENSMUST00000101953 107 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm26076-201ENSMUST00000104065 105 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm12797-201ENSMUST00000118645 273 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm25828-201ENSMUST00000157087 95 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm23180-201ENSMUST00000158686 125 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm23821-201ENSMUST00000158738 106 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Mir100-201ENSMUST00000175270 80 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm28418-201ENSMUST00000186179 423 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm42594-201ENSMUST00000199511 246 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm26497-201ENSMUST00000083146 107 ntBASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Lima1Q9ERG0 Gm12924-201ENSMUST00000121747 318 ntBASIC0□□□□□ -2.41
Lima1Q9ERG0 Gm13797-201ENSMUST00000121792 120 ntBASIC0□□□□□ -2.41
Lima1Q9ERG0 Gm25323-201ENSMUST00000122555 103 ntBASIC0□□□□□ -2.41
Lima1Q9ERG0 Gm23994-201ENSMUST00000158059 88 ntBASIC0□□□□□ -2.41
Lima1Q9ERG0 Gm44455-201ENSMUST00000200061 82 ntBASIC0□□□□□ -2.41
Lima1Q9ERG0 n-R5s96-201ENSMUST00000082574 124 ntBASIC0□□□□□ -2.41
Lima1Q9ERG0 Gm25664-201ENSMUST00000157697 107 ntBASIC-0.01□□□□□ -2.41
Lima1Q9ERG0 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.01□□□□□ -2.41
Lima1Q9ERG0 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.01□□□□□ -2.41
Lima1Q9ERG0 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.01□□□□□ -2.41
Lima1Q9ERG0 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.01□□□□□ -2.41
Lima1Q9ERG0 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.01□□□□□ -2.41
Lima1Q9ERG0 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Mir7227-201ENSMUST00000200408 59 ntBASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Snord82-201ENSMUST00000082889 70 ntBASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Mir411-201ENSMUST00000083543 82 ntBASIC-0.02□□□□□ -2.41
Lima1Q9ERG0 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm24392-201ENSMUST00000158136 103 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm26287-201ENSMUST00000158887 81 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm24667-201ENSMUST00000158938 103 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm22448-201ENSMUST00000179254 107 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 Gm28211-201ENSMUST00000190920 315 ntBASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
Lima1Q9ERG0 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 227 ms