Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm22576-201ENSMUST00000083733 104 ntBASIC2.35□□□□□ -2.03
Upf1Q9EPU0 Gm27722-201ENSMUST00000183908 76 ntBASIC2.34□□□□□ -2.03
Upf1Q9EPU0 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Upf1Q9EPU0 Gm26011-201ENSMUST00000104410 104 ntBASIC2.33□□□□□ -2.04
Upf1Q9EPU0 Gm11856-201ENSMUST00000118712 276 ntBASIC2.33□□□□□ -2.04
Upf1Q9EPU0 Gm25730-201ENSMUST00000178753 165 ntBASIC2.33□□□□□ -2.04
Upf1Q9EPU0 Gm42506-201ENSMUST00000202009 150 ntBASIC2.33□□□□□ -2.04
Upf1Q9EPU0 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.33□□□□□ -2.04
Upf1Q9EPU0 Gm26326-201ENSMUST00000083070 129 ntBASIC2.33□□□□□ -2.04
Upf1Q9EPU0 Gm24616-201ENSMUST00000083274 139 ntBASIC2.33□□□□□ -2.04
Upf1Q9EPU0 Gm14882-201ENSMUST00000117216 218 ntBASIC2.32□□□□□ -2.04
Upf1Q9EPU0 Gm25658-201ENSMUST00000158472 128 ntBASIC2.32□□□□□ -2.04
Upf1Q9EPU0 Gm23208-201ENSMUST00000158666 127 ntBASIC2.32□□□□□ -2.04
Upf1Q9EPU0 Gm27792-201ENSMUST00000184031 115 ntBASIC2.32□□□□□ -2.04
Upf1Q9EPU0 Mir6419-201ENSMUST00000184784 113 ntBASIC2.32□□□□□ -2.04
Upf1Q9EPU0 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.32□□□□□ -2.04
Upf1Q9EPU0 Gm25855-201ENSMUST00000082787 72 ntBASIC2.32□□□□□ -2.04
Upf1Q9EPU0 Gm24044-201ENSMUST00000083107 156 ntBASIC2.32□□□□□ -2.04
Upf1Q9EPU0 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Upf1Q9EPU0 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.31□□□□□ -2.04
Upf1Q9EPU0 Gm25879-201ENSMUST00000104330 107 ntBASIC2.31□□□□□ -2.04
Upf1Q9EPU0 Gm24366-201ENSMUST00000175383 86 ntBASIC2.31□□□□□ -2.04
Upf1Q9EPU0 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Upf1Q9EPU0 Gm38298-201ENSMUST00000193578 118 ntBASIC2.31□□□□□ -2.04
Upf1Q9EPU0 Gm44458-201ENSMUST00000196594 143 ntBASIC2.31□□□□□ -2.04
Upf1Q9EPU0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Gm14568-201ENSMUST00000119321 294 ntBASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Gm15067-201ENSMUST00000119534 156 ntBASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Gm24926-201ENSMUST00000178053 79 ntBASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Gm22632-201ENSMUST00000178266 79 ntBASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Gm27517-201ENSMUST00000184347 236 ntBASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Mir7678-201ENSMUST00000185076 71 ntBASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Gm8508-201ENSMUST00000061226 363 ntBASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Upf1Q9EPU0 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Gm14946-201ENSMUST00000119859 296 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Gm12309-201ENSMUST00000119889 182 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Gm26091-201ENSMUST00000122704 82 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Gm26213-201ENSMUST00000158582 110 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Gm25831-201ENSMUST00000158924 163 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Gm25750-201ENSMUST00000175483 112 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Mir7052-201ENSMUST00000184821 65 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Gm22884-201ENSMUST00000083127 140 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Mir423-201ENSMUST00000083584 109 ntBASIC2.29□□□□□ -2.04
Upf1Q9EPU0 Gm25787-201ENSMUST00000104709 92 ntBASIC2.28□□□□□ -2.04
Upf1Q9EPU0 Gm22999-201ENSMUST00000157082 88 ntBASIC2.28□□□□□ -2.04
Upf1Q9EPU0 Gm22727-201ENSMUST00000158090 116 ntBASIC2.28□□□□□ -2.04
Upf1Q9EPU0 Mir6962-201ENSMUST00000199512 63 ntBASIC2.28□□□□□ -2.04
Upf1Q9EPU0 Gm43865-201ENSMUST00000204721 127 ntBASIC2.28□□□□□ -2.04
Upf1Q9EPU0 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.28□□□□□ -2.04
Upf1Q9EPU0 Snora20-201ENSMUST00000082703 128 ntBASIC2.28□□□□□ -2.04
Upf1Q9EPU0 Gm24900-201ENSMUST00000158128 134 ntBASIC2.27□□□□□ -2.05
Upf1Q9EPU0 Mir7059-201ENSMUST00000184825 59 ntBASIC2.27□□□□□ -2.05
Upf1Q9EPU0 Gm27656-201ENSMUST00000185055 80 ntBASIC2.27□□□□□ -2.05
Upf1Q9EPU0 Gm23509-201ENSMUST00000083080 160 ntBASIC2.27□□□□□ -2.05
Upf1Q9EPU0 Gm23100-201ENSMUST00000083455 141 ntBASIC2.27□□□□□ -2.05
Upf1Q9EPU0 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Upf1Q9EPU0 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Snord71-201ENSMUST00000104361 85 ntBASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Gm16186-201ENSMUST00000120132 216 ntBASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Gm24718-201ENSMUST00000157521 136 ntBASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Gm22079-201ENSMUST00000157592 106 ntBASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Gm26090-201ENSMUST00000157897 128 ntBASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Gm23340-201ENSMUST00000158955 123 ntBASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Gm45268-201ENSMUST00000210046 370 ntBASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
Upf1Q9EPU0 Gm26154-201ENSMUST00000102339 96 ntBASIC2.25□□□□□ -2.05
Upf1Q9EPU0 Gm44489-201ENSMUST00000104619 97 ntBASIC2.25□□□□□ -2.05
Upf1Q9EPU0 Gm21885-201ENSMUST00000178891 327 ntBASIC2.25□□□□□ -2.05
Upf1Q9EPU0 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.25□□□□□ -2.05
Upf1Q9EPU0 Mir148b-201ENSMUST00000083626 97 ntBASIC2.25□□□□□ -2.05
Upf1Q9EPU0 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.25□□□□□ -2.05
Upf1Q9EPU0 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Snord64-201ENSMUST00000104003 67 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm24250-201ENSMUST00000157320 135 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm25161-201ENSMUST00000158913 132 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm23770-201ENSMUST00000178009 108 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm22832-201ENSMUST00000178022 108 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm23863-201ENSMUST00000178265 108 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm24828-201ENSMUST00000178507 108 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm23052-201ENSMUST00000178633 108 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm25729-201ENSMUST00000179050 108 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm25359-201ENSMUST00000179315 108 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm22624-201ENSMUST00000179913 108 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Gm37796-201ENSMUST00000195327 134 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Mir451a-201ENSMUST00000093557 72 ntBASIC2.24□□□□□ -2.05
Upf1Q9EPU0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Upf1Q9EPU0 Gm24238-201ENSMUST00000157792 98 ntBASIC2.23□□□□□ -2.05
Upf1Q9EPU0 Mir3057-201ENSMUST00000175040 91 ntBASIC2.23□□□□□ -2.05
Upf1Q9EPU0 Gm25006-201ENSMUST00000083813 107 ntBASIC2.23□□□□□ -2.05
Upf1Q9EPU0 Gm24523-201ENSMUST00000083965 132 ntBASIC2.23□□□□□ -2.05
Upf1Q9EPU0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms