Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.17□□□□□ -2.38
Ccdc3Q9D6Y1 Mir30a-201ENSMUST00000083471 71 ntBASIC0.17□□□□□ -2.38
Ccdc3Q9D6Y1 Mir532-201ENSMUST00000093630 96 ntBASIC0.17□□□□□ -2.38
Ccdc3Q9D6Y1 Gm26076-201ENSMUST00000104065 105 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm15030-201ENSMUST00000119804 484 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm15213-201ENSMUST00000122098 216 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25828-201ENSMUST00000157087 95 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25664-201ENSMUST00000157697 107 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm24547-201ENSMUST00000158649 149 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm26159-201ENSMUST00000158968 104 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm23375-201ENSMUST00000175407 83 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Mir6365-201ENSMUST00000183990 101 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm28579-201ENSMUST00000186143 369 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm42594-201ENSMUST00000199511 246 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm45673-201ENSMUST00000210293 358 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.16□□□□□ -2.38
Ccdc3Q9D6Y1 Gm25538-201ENSMUST00000101943 107 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm26293-201ENSMUST00000104170 84 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm14919-201ENSMUST00000120839 390 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24559-201ENSMUST00000157519 121 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm22080-201ENSMUST00000157591 106 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25424-201ENSMUST00000157612 58 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm23761-201ENSMUST00000158347 104 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm43505-201ENSMUST00000200579 139 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm45005-201ENSMUST00000206640 157 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25793-201ENSMUST00000083287 107 ntBASIC0.15□□□□□ -2.39
Ccdc3Q9D6Y1 Gm13246-201ENSMUST00000120994 315 ntBASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 Gm22448-201ENSMUST00000179254 107 ntBASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 Gm37313-201ENSMUST00000191673 290 ntBASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 Gm44468-201ENSMUST00000199516 105 ntBASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 Gm44858-201ENSMUST00000207360 154 ntBASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.14□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25875-201ENSMUST00000104323 107 ntBASIC0.13□□□□□ -2.39
Ccdc3Q9D6Y1 Gm22239-201ENSMUST00000175220 103 ntBASIC0.13□□□□□ -2.39
Ccdc3Q9D6Y1 Gm22118-201ENSMUST00000175593 171 ntBASIC0.13□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25024-201ENSMUST00000179667 104 ntBASIC0.13□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25142-201ENSMUST00000082698 107 ntBASIC0.13□□□□□ -2.39
Ccdc3Q9D6Y1 Gm23941-201ENSMUST00000101953 107 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm22784-201ENSMUST00000104088 132 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24833-201ENSMUST00000116775 120 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm23989-201ENSMUST00000117030 66 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm23214-201ENSMUST00000122716 157 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24509-201ENSMUST00000157086 101 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25358-201ENSMUST00000157189 101 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24392-201ENSMUST00000158136 103 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm22387-201ENSMUST00000158191 131 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24549-201ENSMUST00000158647 139 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24667-201ENSMUST00000158938 103 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25300-201ENSMUST00000175284 84 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Mir5624-201ENSMUST00000176635 61 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Mir7227-201ENSMUST00000200408 59 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25814-201ENSMUST00000082754 107 ntBASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Ccdc3Q9D6Y1 Gm15069-201ENSMUST00000117792 192 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Gm15068-201ENSMUST00000119796 192 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24635-201ENSMUST00000122712 128 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Scarna8-201ENSMUST00000158333 131 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Gm23821-201ENSMUST00000158738 106 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Gm22242-201ENSMUST00000175224 118 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Mir3089-201ENSMUST00000175350 84 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Gm28008-201ENSMUST00000184021 186 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Gm19572-201ENSMUST00000214326 338 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC0.11□□□□□ -2.39
Ccdc3Q9D6Y1 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24171-201ENSMUST00000104126 131 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Mir875-201ENSMUST00000104698 78 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm11420-201ENSMUST00000120047 402 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm26402-201ENSMUST00000158499 113 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm26287-201ENSMUST00000158887 81 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Mir6390-201ENSMUST00000184405 129 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm44457-201ENSMUST00000198109 76 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm25634-201ENSMUST00000082667 105 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm26497-201ENSMUST00000083146 107 ntBASIC0.1□□□□□ -2.39
Ccdc3Q9D6Y1 Gm24793-201ENSMUST00000104289 132 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Gm13797-201ENSMUST00000121792 120 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Gm24728-201ENSMUST00000158226 125 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Gm22767-201ENSMUST00000158365 165 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Gm23020-201ENSMUST00000158766 253 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Gm22466-201ENSMUST00000175278 69 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Mir3108-201ENSMUST00000175500 79 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Gm23406-201ENSMUST00000082537 122 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Gm22753-201ENSMUST00000083657 107 ntBASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Ccdc3Q9D6Y1 Gm12771-201ENSMUST00000120246 135 ntBASIC0.08□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25952-201ENSMUST00000175329 74 ntBASIC0.08□□□□□ -2.4
Ccdc3Q9D6Y1 Gm27521-201ENSMUST00000184022 64 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 167 ms