Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm22011-201ENSMUST00000158790 123 ntBASIC1.47□□□□□ -2.17
Ddx56Q9D0R4 Gm27934-201ENSMUST00000158795 63 ntBASIC1.47□□□□□ -2.17
Ddx56Q9D0R4 Gm16546-201ENSMUST00000159442 355 ntBASIC1.47□□□□□ -2.17
Ddx56Q9D0R4 Mir7014-201ENSMUST00000183853 63 ntBASIC1.47□□□□□ -2.17
Ddx56Q9D0R4 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ddx56Q9D0R4 Gm43381-201ENSMUST00000198553 165 ntBASIC1.47□□□□□ -2.17
Ddx56Q9D0R4 Gm44922-201ENSMUST00000206690 90 ntBASIC1.47□□□□□ -2.17
Ddx56Q9D0R4 Gm22946-201ENSMUST00000158558 82 ntBASIC1.46□□□□□ -2.18
Ddx56Q9D0R4 Gm24221-201ENSMUST00000158833 313 ntBASIC1.46□□□□□ -2.18
Ddx56Q9D0R4 Mir488-201ENSMUST00000093595 109 ntBASIC1.46□□□□□ -2.18
Ddx56Q9D0R4 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.46□□□□□ -2.18
Ddx56Q9D0R4 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.46□□□□□ -2.18
Ddx56Q9D0R4 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.46□□□□□ -2.18
Ddx56Q9D0R4 Gm24750-201ENSMUST00000157843 104 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 Gm25831-201ENSMUST00000158924 163 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 Gm44396-201ENSMUST00000199843 114 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 Gm44408-201ENSMUST00000200205 66 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 Gm25636-201ENSMUST00000082666 133 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 Gm25851-201ENSMUST00000082794 107 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 Gm26123-201ENSMUST00000083363 135 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 Mir201-201ENSMUST00000083470 66 ntBASIC1.45□□□□□ -2.18
Ddx56Q9D0R4 Gm23122-201ENSMUST00000157645 103 ntBASIC1.44□□□□□ -2.18
Ddx56Q9D0R4 Gm22809-201ENSMUST00000082743 156 ntBASIC1.44□□□□□ -2.18
Ddx56Q9D0R4 Gm22515-201ENSMUST00000158273 305 ntBASIC1.43□□□□□ -2.18
Ddx56Q9D0R4 Gm22606-201ENSMUST00000158290 103 ntBASIC1.43□□□□□ -2.18
Ddx56Q9D0R4 Gm24638-201ENSMUST00000179807 132 ntBASIC1.43□□□□□ -2.18
Ddx56Q9D0R4 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Mir301b-201ENSMUST00000102333 97 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Gm26076-201ENSMUST00000104065 105 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Gm24232-201ENSMUST00000104314 132 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Gm22074-201ENSMUST00000158595 113 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Mir1961-201ENSMUST00000158643 112 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Gm26097-201ENSMUST00000179642 93 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Gm22169-201ENSMUST00000083229 107 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Ddx56Q9D0R4 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Ddx56Q9D0R4 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.41□□□□□ -2.18
Ddx56Q9D0R4 Gm25882-201ENSMUST00000157784 85 ntBASIC1.41□□□□□ -2.18
Ddx56Q9D0R4 Gm22556-201ENSMUST00000157803 100 ntBASIC1.41□□□□□ -2.18
Ddx56Q9D0R4 Gm24902-201ENSMUST00000158126 123 ntBASIC1.41□□□□□ -2.18
Ddx56Q9D0R4 Mir3569-201ENSMUST00000185080 58 ntBASIC1.41□□□□□ -2.18
Ddx56Q9D0R4 Gm25832-201ENSMUST00000104140 130 ntBASIC1.4□□□□□ -2.19
Ddx56Q9D0R4 Gm26049-201ENSMUST00000157313 108 ntBASIC1.4□□□□□ -2.19
Ddx56Q9D0R4 Gm24401-201ENSMUST00000157868 91 ntBASIC1.4□□□□□ -2.19
Ddx56Q9D0R4 Mir7039-201ENSMUST00000183852 85 ntBASIC1.4□□□□□ -2.19
Ddx56Q9D0R4 Mir468-201ENSMUST00000197332 78 ntBASIC1.4□□□□□ -2.19
Ddx56Q9D0R4 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.4□□□□□ -2.19
Ddx56Q9D0R4 Mir709-201ENSMUST00000102190 88 ntBASIC1.39□□□□□ -2.19
Ddx56Q9D0R4 Gm23130-201ENSMUST00000104252 74 ntBASIC1.39□□□□□ -2.19
Ddx56Q9D0R4 Gm26420-201ENSMUST00000104273 103 ntBASIC1.39□□□□□ -2.19
Ddx56Q9D0R4 Mir1298-201ENSMUST00000116681 98 ntBASIC1.39□□□□□ -2.19
Ddx56Q9D0R4 Gm22790-201ENSMUST00000157229 129 ntBASIC1.39□□□□□ -2.19
Ddx56Q9D0R4 Gm26403-201ENSMUST00000158500 105 ntBASIC1.39□□□□□ -2.19
Ddx56Q9D0R4 Gm16307-201ENSMUST00000161269 210 ntBASIC1.39□□□□□ -2.19
Ddx56Q9D0R4 Gm44462-201ENSMUST00000199696 129 ntBASIC1.39□□□□□ -2.19
Ddx56Q9D0R4 Gm23011-201ENSMUST00000104148 132 ntBASIC1.38□□□□□ -2.19
Ddx56Q9D0R4 Gm22337-201ENSMUST00000157721 132 ntBASIC1.38□□□□□ -2.19
Ddx56Q9D0R4 Gm22425-201ENSMUST00000158532 138 ntBASIC1.38□□□□□ -2.19
Ddx56Q9D0R4 Gm25166-201ENSMUST00000158909 111 ntBASIC1.38□□□□□ -2.19
Ddx56Q9D0R4 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.38□□□□□ -2.19
Ddx56Q9D0R4 Gm22348-201ENSMUST00000178674 79 ntBASIC1.38□□□□□ -2.19
Ddx56Q9D0R4 Gm44948-201ENSMUST00000209050 149 ntBASIC1.38□□□□□ -2.19
Ddx56Q9D0R4 Gm25401-201ENSMUST00000082975 106 ntBASIC1.38□□□□□ -2.19
Ddx56Q9D0R4 Mir547-201ENSMUST00000102051 78 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm25611-201ENSMUST00000104017 133 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm24250-201ENSMUST00000157320 135 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm24076-201ENSMUST00000158179 94 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm23770-201ENSMUST00000178009 108 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm22832-201ENSMUST00000178022 108 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm23863-201ENSMUST00000178265 108 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm24828-201ENSMUST00000178507 108 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm23052-201ENSMUST00000178633 108 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm25729-201ENSMUST00000179050 108 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm25359-201ENSMUST00000179315 108 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm22624-201ENSMUST00000179913 108 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm45268-201ENSMUST00000210046 370 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Gm24311-201ENSMUST00000082570 104 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Snora41-201ENSMUST00000082668 132 ntBASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Ddx56Q9D0R4 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Ddx56Q9D0R4 Gm23209-201ENSMUST00000158667 110 ntBASIC1.36□□□□□ -2.19
Ddx56Q9D0R4 Gm23289-201ENSMUST00000175615 108 ntBASIC1.36□□□□□ -2.19
Ddx56Q9D0R4 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.36□□□□□ -2.19
Ddx56Q9D0R4 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.36□□□□□ -2.19
Ddx56Q9D0R4 Gm22576-201ENSMUST00000083733 104 ntBASIC1.36□□□□□ -2.19
Ddx56Q9D0R4 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
Ddx56Q9D0R4 Mir1966-201ENSMUST00000158807 108 ntBASIC1.35□□□□□ -2.19
Ddx56Q9D0R4 Gm26080-201ENSMUST00000104069 131 ntBASIC1.34□□□□□ -2.19
Ddx56Q9D0R4 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Ddx56Q9D0R4 Gm25599-201ENSMUST00000157816 103 ntBASIC1.34□□□□□ -2.19
Ddx56Q9D0R4 Gm42533-201ENSMUST00000196247 157 ntBASIC1.34□□□□□ -2.19
Ddx56Q9D0R4 Gm42623-201ENSMUST00000197225 379 ntBASIC1.34□□□□□ -2.19
Ddx56Q9D0R4 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.34□□□□□ -2.19
Ddx56Q9D0R4 Gm8219-201ENSMUST00000218309 242 ntBASIC1.34□□□□□ -2.19
Ddx56Q9D0R4 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.34□□□□□ -2.19
Ddx56Q9D0R4 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 199.2 ms