Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm23242-201ENSMUST00000083055 107 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm22364-201ENSMUST00000083097 98 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.14□□□□□ -2.43
Use1Q9CQ56 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
Use1Q9CQ56 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-0.15□□□□□ -2.43
Use1Q9CQ56 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Mir181a-1-201ENSMUST00000083631 87 ntBASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.16□□□□□ -2.44
Use1Q9CQ56 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-0.17□□□□□ -2.44
Use1Q9CQ56 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.17□□□□□ -2.44
Use1Q9CQ56 Gm24211-201ENSMUST00000158264 107 ntBASIC-0.17□□□□□ -2.44
Use1Q9CQ56 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.17□□□□□ -2.44
Use1Q9CQ56 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 Mir721-201ENSMUST00000200230 88 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 AC166341.3-201ENSMUST00000221861 114 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 Mir377-201ENSMUST00000083504 68 ntBASIC-0.18□□□□□ -2.44
Use1Q9CQ56 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.19□□□□□ -2.44
Use1Q9CQ56 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.19□□□□□ -2.44
Use1Q9CQ56 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.19□□□□□ -2.44
Use1Q9CQ56 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.19□□□□□ -2.44
Use1Q9CQ56 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.19□□□□□ -2.44
Use1Q9CQ56 Rny1-201ENSMUST00000083767 112 ntBASIC-0.19□□□□□ -2.44
Use1Q9CQ56 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 Mir5624-201ENSMUST00000176635 61 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.2□□□□□ -2.44
Use1Q9CQ56 Gm25024-201ENSMUST00000179667 104 ntBASIC-0.21□□□□□ -2.44
Use1Q9CQ56 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.21□□□□□ -2.44
Use1Q9CQ56 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.21□□□□□ -2.44
Use1Q9CQ56 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-0.22□□□□□ -2.44
Use1Q9CQ56 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.22□□□□□ -2.44
Use1Q9CQ56 Mir382-201ENSMUST00000083494 76 ntBASIC-0.22□□□□□ -2.44
Use1Q9CQ56 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.45
Use1Q9CQ56 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.23□□□□□ -2.45
Use1Q9CQ56 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.23□□□□□ -2.45
Use1Q9CQ56 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-0.23□□□□□ -2.45
Use1Q9CQ56 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.23□□□□□ -2.45
Use1Q9CQ56 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.23□□□□□ -2.45
Use1Q9CQ56 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.24□□□□□ -2.45
Use1Q9CQ56 Gm22032-201ENSMUST00000116946 116 ntBASIC-0.24□□□□□ -2.45
Use1Q9CQ56 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.24□□□□□ -2.45
Use1Q9CQ56 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.24□□□□□ -2.45
Use1Q9CQ56 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.24□□□□□ -2.45
Use1Q9CQ56 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.24□□□□□ -2.45
Use1Q9CQ56 Gm44858-201ENSMUST00000207360 154 ntBASIC-0.24□□□□□ -2.45
Use1Q9CQ56 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.24□□□□□ -2.45
Use1Q9CQ56 Snord85-201ENSMUST00000083262 73 ntBASIC-0.24□□□□□ -2.45
Use1Q9CQ56 Gm24737-201ENSMUST00000158861 100 ntBASIC-0.25□□□□□ -2.45
Use1Q9CQ56 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.25□□□□□ -2.45
Use1Q9CQ56 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.25□□□□□ -2.45
Use1Q9CQ56 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
Use1Q9CQ56 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.26□□□□□ -2.45
Use1Q9CQ56 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.26□□□□□ -2.45
Use1Q9CQ56 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.26□□□□□ -2.45
Use1Q9CQ56 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.26□□□□□ -2.45
Use1Q9CQ56 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.26□□□□□ -2.45
Use1Q9CQ56 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.26□□□□□ -2.45
Use1Q9CQ56 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.26□□□□□ -2.45
Use1Q9CQ56 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.27□□□□□ -2.45
Use1Q9CQ56 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.27□□□□□ -2.45
Use1Q9CQ56 Gm24392-201ENSMUST00000158136 103 ntBASIC-0.27□□□□□ -2.45
Use1Q9CQ56 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.27□□□□□ -2.45
Use1Q9CQ56 Gm24667-201ENSMUST00000158938 103 ntBASIC-0.27□□□□□ -2.45
Use1Q9CQ56 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.27□□□□□ -2.45
Use1Q9CQ56 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.27□□□□□ -2.45
Use1Q9CQ56 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms