Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.17□□□□□ -2.44
Krt88Q9CPR6 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.17□□□□□ -2.44
Krt88Q9CPR6 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.17□□□□□ -2.44
Krt88Q9CPR6 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.17□□□□□ -2.44
Krt88Q9CPR6 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
Krt88Q9CPR6 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.17□□□□□ -2.44
Krt88Q9CPR6 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Krt88Q9CPR6 Gm24192-201ENSMUST00000157978 145 ntBASIC-0.18□□□□□ -2.44
Krt88Q9CPR6 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.18□□□□□ -2.44
Krt88Q9CPR6 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.18□□□□□ -2.44
Krt88Q9CPR6 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.18□□□□□ -2.44
Krt88Q9CPR6 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.18□□□□□ -2.44
Krt88Q9CPR6 Snord42a-201ENSMUST00000082606 65 ntBASIC-0.18□□□□□ -2.44
Krt88Q9CPR6 Mir214-201ENSMUST00000083582 110 ntBASIC-0.18□□□□□ -2.44
Krt88Q9CPR6 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.19□□□□□ -2.44
Krt88Q9CPR6 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.19□□□□□ -2.44
Krt88Q9CPR6 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.19□□□□□ -2.44
Krt88Q9CPR6 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.19□□□□□ -2.44
Krt88Q9CPR6 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.2□□□□□ -2.44
Krt88Q9CPR6 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.2□□□□□ -2.44
Krt88Q9CPR6 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.2□□□□□ -2.44
Krt88Q9CPR6 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.2□□□□□ -2.44
Krt88Q9CPR6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.2□□□□□ -2.44
Krt88Q9CPR6 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.2□□□□□ -2.44
Krt88Q9CPR6 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.2□□□□□ -2.44
Krt88Q9CPR6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 Gm42622-201ENSMUST00000197229 355 ntBASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 AC167192.1-201ENSMUST00000225908 139 ntBASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
Krt88Q9CPR6 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-0.22□□□□□ -2.44
Krt88Q9CPR6 AC108945.1-201ENSMUST00000226477 94 ntBASIC-0.22□□□□□ -2.44
Krt88Q9CPR6 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.22□□□□□ -2.44
Krt88Q9CPR6 Rny3-201ENSMUST00000083011 102 ntBASIC-0.22□□□□□ -2.44
Krt88Q9CPR6 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Mir7093-201ENSMUST00000184195 101 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm43976-201ENSMUST00000203637 235 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm44687-201ENSMUST00000204975 235 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.23□□□□□ -2.45
Krt88Q9CPR6 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Mir377-201ENSMUST00000083504 68 ntBASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
Krt88Q9CPR6 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.25□□□□□ -2.45
Krt88Q9CPR6 Gm12748-201ENSMUST00000120763 504 ntBASIC-0.25□□□□□ -2.45
Krt88Q9CPR6 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.25□□□□□ -2.45
Krt88Q9CPR6 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.25□□□□□ -2.45
Krt88Q9CPR6 Snord85-201ENSMUST00000083262 73 ntBASIC-0.25□□□□□ -2.45
Krt88Q9CPR6 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Mir721-201ENSMUST00000200230 88 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.26□□□□□ -2.45
Krt88Q9CPR6 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm28489-201ENSMUST00000186655 316 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.27□□□□□ -2.45
Krt88Q9CPR6 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.28□□□□□ -2.45
Krt88Q9CPR6 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.28□□□□□ -2.45
Krt88Q9CPR6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.28□□□□□ -2.45
Krt88Q9CPR6 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.28□□□□□ -2.45
Krt88Q9CPR6 AC154296.2-201ENSMUST00000214696 545 ntBASIC-0.28□□□□□ -2.45
Krt88Q9CPR6 Mir141-201ENSMUST00000083540 72 ntBASIC-0.28□□□□□ -2.45
Krt88Q9CPR6 Mir183-201ENSMUST00000083685 70 ntBASIC-0.28□□□□□ -2.45
Krt88Q9CPR6 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.28□□□□□ -2.45
Krt88Q9CPR6 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
Krt88Q9CPR6 Mir669p-2-201ENSMUST00000103868 87 ntBASIC-0.29□□□□□ -2.46
Krt88Q9CPR6 Mir669p-1-201ENSMUST00000103884 87 ntBASIC-0.29□□□□□ -2.46
Krt88Q9CPR6 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.29□□□□□ -2.46
Krt88Q9CPR6 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.29□□□□□ -2.46
Krt88Q9CPR6 Gm27723-201ENSMUST00000157398 63 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 332.7 ms