Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Gm22999-201ENSMUST00000157082 88 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Gm23468-201ENSMUST00000157125 108 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Gm24674-201ENSMUST00000179194 104 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Mir7k-201ENSMUST00000184115 110 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Gm43626-201ENSMUST00000198575 162 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.75□□□□□ -1.97
Trim11Q99PQ2 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.75□□□□□ -1.97
Trim11Q99PQ2 Gm24049-201ENSMUST00000102409 100 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Gm25270-201ENSMUST00000122606 138 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Gm23983-201ENSMUST00000157142 114 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Gm24210-201ENSMUST00000158263 133 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Gm25711-201ENSMUST00000158633 128 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Gm16584-201ENSMUST00000159267 189 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Gm26073-201ENSMUST00000179906 127 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Mir7047-201ENSMUST00000184595 64 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Mir21c-201ENSMUST00000184910 78 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trim11Q99PQ2 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Trim11Q99PQ2 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.74□□□□□ -1.97
Trim11Q99PQ2 Gm24627-201ENSMUST00000122764 138 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm23826-201ENSMUST00000157394 119 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm24000-201ENSMUST00000158063 89 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm23761-201ENSMUST00000158347 104 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm23917-201ENSMUST00000175256 98 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Trbv25-201ENSMUST00000194700 273 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm44325-201ENSMUST00000196757 77 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm25697-201ENSMUST00000082902 98 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm23249-201ENSMUST00000083369 161 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.73□□□□□ -1.97
Trim11Q99PQ2 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Trim11Q99PQ2 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.72□□□□□ -1.97
Trim11Q99PQ2 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trim11Q99PQ2 Gm23011-201ENSMUST00000104148 132 ntBASIC2.72□□□□□ -1.97
Trim11Q99PQ2 Gm22151-201ENSMUST00000116963 58 ntBASIC2.72□□□□□ -1.97
Trim11Q99PQ2 Gm24637-201ENSMUST00000158674 85 ntBASIC2.72□□□□□ -1.97
Trim11Q99PQ2 Gm22503-201ENSMUST00000158983 115 ntBASIC2.72□□□□□ -1.97
Trim11Q99PQ2 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.72□□□□□ -1.97
Trim11Q99PQ2 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trim11Q99PQ2 Gm26339-201ENSMUST00000102368 99 ntBASIC2.71□□□□□ -1.98
Trim11Q99PQ2 Mir802-201ENSMUST00000103258 97 ntBASIC2.71□□□□□ -1.98
Trim11Q99PQ2 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.71□□□□□ -1.98
Trim11Q99PQ2 Gm22731-201ENSMUST00000158086 94 ntBASIC2.71□□□□□ -1.98
Trim11Q99PQ2 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trim11Q99PQ2 Gm23747-201ENSMUST00000104228 131 ntBASIC2.7□□□□□ -1.98
Trim11Q99PQ2 Gm23715-201ENSMUST00000157354 106 ntBASIC2.7□□□□□ -1.98
Trim11Q99PQ2 Mir29c-201ENSMUST00000083614 88 ntBASIC2.7□□□□□ -1.98
Trim11Q99PQ2 Gm24691-201ENSMUST00000157762 140 ntBASIC2.69□□□□□ -1.98
Trim11Q99PQ2 Gm23065-201ENSMUST00000158236 130 ntBASIC2.69□□□□□ -1.98
Trim11Q99PQ2 Gm22605-201ENSMUST00000158289 108 ntBASIC2.69□□□□□ -1.98
Trim11Q99PQ2 Gm23181-201ENSMUST00000158685 110 ntBASIC2.69□□□□□ -1.98
Trim11Q99PQ2 Gm25996-201ENSMUST00000175393 117 ntBASIC2.69□□□□□ -1.98
Trim11Q99PQ2 Gm43722-201ENSMUST00000196054 124 ntBASIC2.69□□□□□ -1.98
Trim11Q99PQ2 Gm6109-201ENSMUST00000223297 348 ntBASIC2.69□□□□□ -1.98
Trim11Q99PQ2 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm22677-201ENSMUST00000116977 108 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm11248-201ENSMUST00000119568 201 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm14588-201ENSMUST00000119895 172 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm23390-201ENSMUST00000157393 106 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm25329-201ENSMUST00000158041 126 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm22089-201ENSMUST00000158336 102 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm27987-201ENSMUST00000184023 93 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Gm42807-201ENSMUST00000200141 329 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Snora20-201ENSMUST00000082703 128 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Mir301-201ENSMUST00000083655 86 ntBASIC2.68□□□□□ -1.98
Trim11Q99PQ2 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Trim11Q99PQ2 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.67□□□□□ -1.98
Trim11Q99PQ2 Gm25866-201ENSMUST00000158245 112 ntBASIC2.67□□□□□ -1.98
Trim11Q99PQ2 Gm24922-201ENSMUST00000158511 102 ntBASIC2.67□□□□□ -1.98
Trim11Q99PQ2 Gm27532-201ENSMUST00000183726 113 ntBASIC2.67□□□□□ -1.98
Trim11Q99PQ2 Gm45386-201ENSMUST00000210194 218 ntBASIC2.67□□□□□ -1.98
Trim11Q99PQ2 Gm3702-201ENSMUST00000211754 346 ntBASIC2.67□□□□□ -1.98
Trim11Q99PQ2 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.67□□□□□ -1.98
Trim11Q99PQ2 Mir423-201ENSMUST00000083584 109 ntBASIC2.67□□□□□ -1.98
Trim11Q99PQ2 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm22752-201ENSMUST00000102083 109 ntBASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm25407-201ENSMUST00000104102 134 ntBASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm23175-201ENSMUST00000104371 132 ntBASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm25354-201ENSMUST00000179110 105 ntBASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm42795-201ENSMUST00000198847 76 ntBASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm19855-201ENSMUST00000210145 249 ntBASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm25696-201ENSMUST00000082900 105 ntBASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm25644-201ENSMUST00000083209 107 ntBASIC2.66□□□□□ -1.98
Trim11Q99PQ2 Gm26080-201ENSMUST00000104069 131 ntBASIC2.65□□□□□ -1.99
Trim11Q99PQ2 Gm22338-201ENSMUST00000157715 129 ntBASIC2.65□□□□□ -1.99
Trim11Q99PQ2 Gm22947-201ENSMUST00000158559 91 ntBASIC2.65□□□□□ -1.99
Trim11Q99PQ2 Gm25229-201ENSMUST00000178587 79 ntBASIC2.65□□□□□ -1.99
Trim11Q99PQ2 Mir490-201ENSMUST00000093567 84 ntBASIC2.65□□□□□ -1.99
Trim11Q99PQ2 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Gm22522-201ENSMUST00000158271 151 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Gm16561-201ENSMUST00000163001 192 ntBASIC2.64□□□□□ -1.99
Trim11Q99PQ2 Snora26-201ENSMUST00000175614 121 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms