Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm25068-201ENSMUST00000103895 110 ntBASIC1.46□□□□□ -2.18
Usp11Q99K46 Gm24232-201ENSMUST00000104314 132 ntBASIC1.46□□□□□ -2.18
Usp11Q99K46 Gm8219-201ENSMUST00000218309 242 ntBASIC1.46□□□□□ -2.18
Usp11Q99K46 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.46□□□□□ -2.18
Usp11Q99K46 Snord13-201ENSMUST00000157627 104 ntBASIC1.45□□□□□ -2.18
Usp11Q99K46 Gm23221-201ENSMUST00000158118 93 ntBASIC1.45□□□□□ -2.18
Usp11Q99K46 Gm44976-201ENSMUST00000205543 261 ntBASIC1.45□□□□□ -2.18
Usp11Q99K46 Snora20-201ENSMUST00000082703 128 ntBASIC1.45□□□□□ -2.18
Usp11Q99K46 Gm25038-201ENSMUST00000082928 130 ntBASIC1.45□□□□□ -2.18
Usp11Q99K46 Gm26326-201ENSMUST00000083070 129 ntBASIC1.45□□□□□ -2.18
Usp11Q99K46 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Usp11Q99K46 Mir544-201ENSMUST00000103813 78 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 Gm25364-201ENSMUST00000158851 107 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 Gm23337-201ENSMUST00000158959 118 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Usp11Q99K46 Gm22403-201ENSMUST00000174919 84 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 Mir3061-201ENSMUST00000175129 91 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 Gm27493-201ENSMUST00000184128 78 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 Gm16976-205ENSMUST00000227324 226 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.44□□□□□ -2.18
Usp11Q99K46 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Usp11Q99K46 Gm22105-201ENSMUST00000116734 116 ntBASIC1.43□□□□□ -2.18
Usp11Q99K46 Gm23122-201ENSMUST00000157645 103 ntBASIC1.43□□□□□ -2.18
Usp11Q99K46 Mir7675-201ENSMUST00000184262 58 ntBASIC1.43□□□□□ -2.18
Usp11Q99K46 Gm18502-201ENSMUST00000218679 199 ntBASIC1.43□□□□□ -2.18
Usp11Q99K46 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.43□□□□□ -2.18
Usp11Q99K46 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.43□□□□□ -2.18
Usp11Q99K46 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm25980-201ENSMUST00000157176 218 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm22082-201ENSMUST00000157587 161 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm23277-201ENSMUST00000157914 136 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm24677-201ENSMUST00000158755 150 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm25936-201ENSMUST00000179952 114 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm43381-201ENSMUST00000198553 165 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm45471-201ENSMUST00000211270 281 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Gm23947-201ENSMUST00000093636 107 ntBASIC1.42□□□□□ -2.18
Usp11Q99K46 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Usp11Q99K46 Gm24263-201ENSMUST00000104059 107 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 Gm23760-201ENSMUST00000158350 116 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 Gm37545-201ENSMUST00000186512 148 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 Gm18665-201ENSMUST00000189783 270 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 Gm44358-201ENSMUST00000196301 98 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 Mir3969-201ENSMUST00000197106 92 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 Gm23299-201ENSMUST00000082708 79 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 Snord61-201ENSMUST00000083176 71 ntBASIC1.41□□□□□ -2.18
Usp11Q99K46 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Usp11Q99K46 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.4□□□□□ -2.19
Usp11Q99K46 Gm24262-201ENSMUST00000157431 144 ntBASIC1.4□□□□□ -2.19
Usp11Q99K46 Gm26090-201ENSMUST00000157897 128 ntBASIC1.4□□□□□ -2.19
Usp11Q99K46 Mir7665-201ENSMUST00000184907 63 ntBASIC1.4□□□□□ -2.19
Usp11Q99K46 Gm22576-201ENSMUST00000083733 104 ntBASIC1.4□□□□□ -2.19
Usp11Q99K46 Mir451a-201ENSMUST00000093557 72 ntBASIC1.4□□□□□ -2.19
Usp11Q99K46 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Usp11Q99K46 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.39□□□□□ -2.19
Usp11Q99K46 Gm25949-201ENSMUST00000175333 114 ntBASIC1.39□□□□□ -2.19
Usp11Q99K46 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Usp11Q99K46 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.39□□□□□ -2.19
Usp11Q99K46 Mir489-201ENSMUST00000093599 107 ntBASIC1.39□□□□□ -2.19
Usp11Q99K46 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
Usp11Q99K46 Gm23336-201ENSMUST00000117023 123 ntBASIC1.38□□□□□ -2.19
Usp11Q99K46 Gm12309-201ENSMUST00000119889 182 ntBASIC1.38□□□□□ -2.19
Usp11Q99K46 Gm24379-201ENSMUST00000122695 86 ntBASIC1.38□□□□□ -2.19
Usp11Q99K46 Gm25769-201ENSMUST00000158569 127 ntBASIC1.38□□□□□ -2.19
Usp11Q99K46 Gm43911-201ENSMUST00000203097 76 ntBASIC1.38□□□□□ -2.19
Usp11Q99K46 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.38□□□□□ -2.19
Usp11Q99K46 Snord1a-201ENSMUST00000083160 74 ntBASIC1.38□□□□□ -2.19
Usp11Q99K46 Gm10172-201ENSMUST00000085929 558 ntBASIC1.38□□□□□ -2.19
Usp11Q99K46 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Usp11Q99K46 Gm26082-201ENSMUST00000104070 127 ntBASIC1.37□□□□□ -2.19
Usp11Q99K46 Gm26420-201ENSMUST00000104273 103 ntBASIC1.37□□□□□ -2.19
Usp11Q99K46 Snord90-201ENSMUST00000104568 111 ntBASIC1.37□□□□□ -2.19
Usp11Q99K46 Gm14502-201ENSMUST00000118154 113 ntBASIC1.37□□□□□ -2.19
Usp11Q99K46 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.37□□□□□ -2.19
Usp11Q99K46 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.37□□□□□ -2.19
Usp11Q99K46 Mir669b-201ENSMUST00000102172 97 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Gm24865-201ENSMUST00000103246 96 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Mir654-201ENSMUST00000104787 84 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Gm25541-201ENSMUST00000116888 126 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.36□□□□□ -2.19
Usp11Q99K46 Gm26038-201ENSMUST00000158151 106 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Gm22929-201ENSMUST00000175517 107 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Gm23419-201ENSMUST00000175523 84 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Gm22802-201ENSMUST00000175621 89 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Mir6962-201ENSMUST00000199512 63 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Usp11Q99K46 BC022960-201ENSMUST00000119987 1815 ntBASIC1.36□□□□□ -2.19
Usp11Q99K46 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Usp11Q99K46 Gm26076-201ENSMUST00000104065 105 ntBASIC1.35□□□□□ -2.19
Usp11Q99K46 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.35□□□□□ -2.19
Usp11Q99K46 Gm23106-201ENSMUST00000157554 101 ntBASIC1.35□□□□□ -2.19
Usp11Q99K46 Gm24880-201ENSMUST00000158776 85 ntBASIC1.35□□□□□ -2.19
Usp11Q99K46 Gm25071-201ENSMUST00000175232 70 ntBASIC1.35□□□□□ -2.19
Usp11Q99K46 Gm44859-201ENSMUST00000207831 94 ntBASIC1.35□□□□□ -2.19
Usp11Q99K46 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 166.8 ms