Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm22554-201ENSMUST00000157798 147 ntBASIC2.47□□□□□ -2.01
Rpa1Q8VEE4 Gm24958-201ENSMUST00000158009 97 ntBASIC2.47□□□□□ -2.01
Rpa1Q8VEE4 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.47□□□□□ -2.01
Rpa1Q8VEE4 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.47□□□□□ -2.01
Rpa1Q8VEE4 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Rpa1Q8VEE4 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.46□□□□□ -2.02
Rpa1Q8VEE4 Gm25011-201ENSMUST00000158398 126 ntBASIC2.46□□□□□ -2.02
Rpa1Q8VEE4 Gm20391-201ENSMUST00000174722 106 ntBASIC2.46□□□□□ -2.02
Rpa1Q8VEE4 Gm23375-201ENSMUST00000175407 83 ntBASIC2.46□□□□□ -2.02
Rpa1Q8VEE4 Mir7k-201ENSMUST00000184115 110 ntBASIC2.46□□□□□ -2.02
Rpa1Q8VEE4 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.46□□□□□ -2.02
Rpa1Q8VEE4 Gm23244-201ENSMUST00000083375 92 ntBASIC2.46□□□□□ -2.02
Rpa1Q8VEE4 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.46□□□□□ -2.02
Rpa1Q8VEE4 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Rpa1Q8VEE4 Gm23128-201ENSMUST00000104257 132 ntBASIC2.45□□□□□ -2.02
Rpa1Q8VEE4 Gm24880-201ENSMUST00000158776 85 ntBASIC2.45□□□□□ -2.02
Rpa1Q8VEE4 Traj61-201ENSMUST00000165025 72 ntBASIC2.45□□□□□ -2.02
Rpa1Q8VEE4 Mir6379-201ENSMUST00000183392 115 ntBASIC2.45□□□□□ -2.02
Rpa1Q8VEE4 Gm23128-202ENSMUST00000196578 133 ntBASIC2.45□□□□□ -2.02
Rpa1Q8VEE4 Mir221-201ENSMUST00000083488 95 ntBASIC2.45□□□□□ -2.02
Rpa1Q8VEE4 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Rpa1Q8VEE4 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Gm25730-201ENSMUST00000178753 165 ntBASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Gm3852-201ENSMUST00000182781 264 ntBASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Gm27505-201ENSMUST00000185071 110 ntBASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Gm42795-201ENSMUST00000198847 76 ntBASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Gm44807-201ENSMUST00000206115 154 ntBASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Gm44966-201ENSMUST00000208096 157 ntBASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Rpa1Q8VEE4 Gm23747-201ENSMUST00000104228 131 ntBASIC2.43□□□□□ -2.02
Rpa1Q8VEE4 Gm25393-201ENSMUST00000157336 285 ntBASIC2.43□□□□□ -2.02
Rpa1Q8VEE4 Gm24212-201ENSMUST00000158258 132 ntBASIC2.43□□□□□ -2.02
Rpa1Q8VEE4 Gm25838-201ENSMUST00000158920 120 ntBASIC2.43□□□□□ -2.02
Rpa1Q8VEE4 Gm44393-201ENSMUST00000197418 138 ntBASIC2.43□□□□□ -2.02
Rpa1Q8VEE4 Gm44526-201ENSMUST00000204664 121 ntBASIC2.43□□□□□ -2.02
Rpa1Q8VEE4 Mir654-201ENSMUST00000104787 84 ntBASIC2.42□□□□□ -2.02
Rpa1Q8VEE4 Gm24907-201ENSMUST00000116932 128 ntBASIC2.42□□□□□ -2.02
Rpa1Q8VEE4 Gm24210-201ENSMUST00000158263 133 ntBASIC2.42□□□□□ -2.02
Rpa1Q8VEE4 Gm16550-201ENSMUST00000162550 126 ntBASIC2.42□□□□□ -2.02
Rpa1Q8VEE4 Mir3057-201ENSMUST00000175040 91 ntBASIC2.42□□□□□ -2.02
Rpa1Q8VEE4 Gm23860-201ENSMUST00000179446 132 ntBASIC2.42□□□□□ -2.02
Rpa1Q8VEE4 Gm25528-201ENSMUST00000180264 132 ntBASIC2.42□□□□□ -2.02
Rpa1Q8VEE4 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.42□□□□□ -2.02
Rpa1Q8VEE4 Gm22772-201ENSMUST00000104451 121 ntBASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Gm16021-201ENSMUST00000121176 219 ntBASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Gm22083-201ENSMUST00000157586 102 ntBASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Gm25066-201ENSMUST00000158145 123 ntBASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Gm22425-201ENSMUST00000158532 138 ntBASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Gm27517-201ENSMUST00000184347 236 ntBASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Mir6993-201ENSMUST00000184912 65 ntBASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Gm24313-201ENSMUST00000082561 133 ntBASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Rpa1Q8VEE4 Gm14588-201ENSMUST00000119895 172 ntBASIC2.4□□□□□ -2.03
Rpa1Q8VEE4 Gm26280-201ENSMUST00000157096 101 ntBASIC2.4□□□□□ -2.03
Rpa1Q8VEE4 Gm25044-201ENSMUST00000158603 104 ntBASIC2.4□□□□□ -2.03
Rpa1Q8VEE4 Gm16539-201ENSMUST00000160086 327 ntBASIC2.4□□□□□ -2.03
Rpa1Q8VEE4 Mir7013-201ENSMUST00000183540 72 ntBASIC2.4□□□□□ -2.03
Rpa1Q8VEE4 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.4□□□□□ -2.03
Rpa1Q8VEE4 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.4□□□□□ -2.03
Rpa1Q8VEE4 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Rpa1Q8VEE4 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 Snord78-201ENSMUST00000104032 66 ntBASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 Gm24649-201ENSMUST00000157106 134 ntBASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 Gm24947-201ENSMUST00000158334 110 ntBASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 Gm25658-201ENSMUST00000158472 128 ntBASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 Snora24-201ENSMUST00000174989 130 ntBASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 Mir5104-201ENSMUST00000175319 94 ntBASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.39□□□□□ -2.03
Rpa1Q8VEE4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Gm11248-201ENSMUST00000119568 201 ntBASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Gm25153-201ENSMUST00000157118 156 ntBASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Gm22212-201ENSMUST00000158096 106 ntBASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Gm44462-201ENSMUST00000199696 129 ntBASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Gm24044-201ENSMUST00000083107 156 ntBASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.38□□□□□ -2.03
Rpa1Q8VEE4 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Gm25887-201ENSMUST00000157777 84 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Gm22429-201ENSMUST00000158553 130 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Gm22200-201ENSMUST00000158614 67 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Mir3061-201ENSMUST00000175129 91 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Gm21885-201ENSMUST00000178891 327 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Gm27532-201ENSMUST00000183726 113 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Gm43865-201ENSMUST00000204721 127 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.37□□□□□ -2.03
Rpa1Q8VEE4 Gm24670-201ENSMUST00000104154 132 ntBASIC2.36□□□□□ -2.03
Rpa1Q8VEE4 Gm14674-201ENSMUST00000117816 342 ntBASIC2.36□□□□□ -2.03
Rpa1Q8VEE4 Gm24661-201ENSMUST00000083205 104 ntBASIC2.36□□□□□ -2.03
Rpa1Q8VEE4 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Rpa1Q8VEE4 Gm25022-201ENSMUST00000102205 83 ntBASIC2.35□□□□□ -2.03
Rpa1Q8VEE4 Gm23391-201ENSMUST00000157579 104 ntBASIC2.35□□□□□ -2.03
Rpa1Q8VEE4 Gm24900-201ENSMUST00000158128 134 ntBASIC2.35□□□□□ -2.03
Rpa1Q8VEE4 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 187.6 ms