Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm27521-201ENSMUST00000184022 64 ntBASIC0.19□□□□□ -2.38
Nudcd3Q8R1N4 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Nudcd3Q8R1N4 Gm44468-201ENSMUST00000199516 105 ntBASIC0.19□□□□□ -2.38
Nudcd3Q8R1N4 Gm26123-201ENSMUST00000083363 135 ntBASIC0.19□□□□□ -2.38
Nudcd3Q8R1N4 Mir532-201ENSMUST00000093630 96 ntBASIC0.19□□□□□ -2.38
Nudcd3Q8R1N4 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Mir710-201ENSMUST00000102088 110 ntBASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Gm23126-201ENSMUST00000104260 134 ntBASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Gm12797-201ENSMUST00000118645 273 ntBASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Gm25664-201ENSMUST00000157697 107 ntBASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Gm25494-201ENSMUST00000158143 100 ntBASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Gm23406-201ENSMUST00000082537 122 ntBASIC0.18□□□□□ -2.38
Nudcd3Q8R1N4 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Nudcd3Q8R1N4 Gm24833-201ENSMUST00000116775 120 ntBASIC0.17□□□□□ -2.38
Nudcd3Q8R1N4 Scarna8-201ENSMUST00000158333 131 ntBASIC0.17□□□□□ -2.38
Nudcd3Q8R1N4 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.17□□□□□ -2.38
Nudcd3Q8R1N4 Gm22051-201ENSMUST00000117002 127 ntBASIC0.16□□□□□ -2.38
Nudcd3Q8R1N4 Gm16546-201ENSMUST00000159442 355 ntBASIC0.16□□□□□ -2.38
Nudcd3Q8R1N4 Mir3108-201ENSMUST00000175500 79 ntBASIC0.16□□□□□ -2.38
Nudcd3Q8R1N4 Gm24415-201ENSMUST00000180218 107 ntBASIC0.16□□□□□ -2.38
Nudcd3Q8R1N4 Gm44977-201ENSMUST00000205283 420 ntBASIC0.16□□□□□ -2.38
Nudcd3Q8R1N4 Gm22686-201ENSMUST00000082847 100 ntBASIC0.16□□□□□ -2.38
Nudcd3Q8R1N4 Gm22576-201ENSMUST00000083733 104 ntBASIC0.16□□□□□ -2.38
Nudcd3Q8R1N4 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Gm26076-201ENSMUST00000104065 105 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Gm25416-201ENSMUST00000104221 107 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Gm16186-201ENSMUST00000120132 216 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Gm23655-201ENSMUST00000122627 105 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Gm26402-201ENSMUST00000158499 113 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Gm28008-201ENSMUST00000184021 186 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Gm45313-201ENSMUST00000210584 178 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Mir200a-201ENSMUST00000083466 90 ntBASIC0.15□□□□□ -2.39
Nudcd3Q8R1N4 Gm24423-201ENSMUST00000101982 106 ntBASIC0.14□□□□□ -2.39
Nudcd3Q8R1N4 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.14□□□□□ -2.39
Nudcd3Q8R1N4 Gm23219-201ENSMUST00000158123 87 ntBASIC0.14□□□□□ -2.39
Nudcd3Q8R1N4 Gm26159-201ENSMUST00000158968 104 ntBASIC0.14□□□□□ -2.39
Nudcd3Q8R1N4 Mir6390-201ENSMUST00000184405 129 ntBASIC0.14□□□□□ -2.39
Nudcd3Q8R1N4 Gm22571-201ENSMUST00000082984 70 ntBASIC0.14□□□□□ -2.39
Nudcd3Q8R1N4 Mir200b-201ENSMUST00000083615 70 ntBASIC0.14□□□□□ -2.39
Nudcd3Q8R1N4 Gm10222-201ENSMUST00000088336 294 ntBASIC0.14□□□□□ -2.39
Nudcd3Q8R1N4 Gm22520-201ENSMUST00000158269 129 ntBASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 Mir6905-201ENSMUST00000184228 70 ntBASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 Gm44457-201ENSMUST00000198109 76 ntBASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 Gm26447-201ENSMUST00000082448 129 ntBASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 Mir224-201ENSMUST00000083608 82 ntBASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.13□□□□□ -2.39
Nudcd3Q8R1N4 Gm25611-201ENSMUST00000104017 133 ntBASIC0.12□□□□□ -2.39
Nudcd3Q8R1N4 Gm22999-201ENSMUST00000157082 88 ntBASIC0.12□□□□□ -2.39
Nudcd3Q8R1N4 Gm25952-201ENSMUST00000175329 74 ntBASIC0.12□□□□□ -2.39
Nudcd3Q8R1N4 Gm22753-201ENSMUST00000083657 107 ntBASIC0.12□□□□□ -2.39
Nudcd3Q8R1N4 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Nudcd3Q8R1N4 Gm25444-201ENSMUST00000158999 113 ntBASIC0.11□□□□□ -2.39
Nudcd3Q8R1N4 Gm22242-201ENSMUST00000175224 118 ntBASIC0.11□□□□□ -2.39
Nudcd3Q8R1N4 Gm25235-201ENSMUST00000179933 107 ntBASIC0.11□□□□□ -2.39
Nudcd3Q8R1N4 Gm43505-201ENSMUST00000200579 139 ntBASIC0.11□□□□□ -2.39
Nudcd3Q8R1N4 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.11□□□□□ -2.39
Nudcd3Q8R1N4 Gm11904-201ENSMUST00000120562 248 ntBASIC0.1□□□□□ -2.39
Nudcd3Q8R1N4 Mir669k-201ENSMUST00000177742 127 ntBASIC0.1□□□□□ -2.39
Nudcd3Q8R1N4 Gm25673-201ENSMUST00000179957 127 ntBASIC0.1□□□□□ -2.39
Nudcd3Q8R1N4 Mir7077-201ENSMUST00000183991 57 ntBASIC0.1□□□□□ -2.39
Nudcd3Q8R1N4 Gm11420-201ENSMUST00000120047 402 ntBASIC0.09□□□□□ -2.4
Nudcd3Q8R1N4 Gm11204-201ENSMUST00000122438 147 ntBASIC0.09□□□□□ -2.4
Nudcd3Q8R1N4 Gm23002-201ENSMUST00000179221 107 ntBASIC0.09□□□□□ -2.4
Nudcd3Q8R1N4 Mir7039-201ENSMUST00000183852 85 ntBASIC0.09□□□□□ -2.4
Nudcd3Q8R1N4 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.09□□□□□ -2.4
Nudcd3Q8R1N4 Gm24765-201ENSMUST00000083691 103 ntBASIC0.09□□□□□ -2.4
Nudcd3Q8R1N4 Gm6952-201ENSMUST00000118629 159 ntBASIC0.08□□□□□ -2.4
Nudcd3Q8R1N4 Mir7229-201ENSMUST00000197062 53 ntBASIC0.08□□□□□ -2.4
Nudcd3Q8R1N4 Gm22491-201ENSMUST00000157190 102 ntBASIC0.07□□□□□ -2.4
Nudcd3Q8R1N4 Gm25771-201ENSMUST00000158565 144 ntBASIC0.07□□□□□ -2.4
Nudcd3Q8R1N4 Gm25718-201ENSMUST00000158632 118 ntBASIC0.07□□□□□ -2.4
Nudcd3Q8R1N4 Gm27672-201ENSMUST00000183751 204 ntBASIC0.07□□□□□ -2.4
Nudcd3Q8R1N4 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
Nudcd3Q8R1N4 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Nudcd3Q8R1N4 Gm26293-201ENSMUST00000104170 84 ntBASIC0.06□□□□□ -2.4
Nudcd3Q8R1N4 Gm13345-201ENSMUST00000121928 228 ntBASIC0.06□□□□□ -2.4
Nudcd3Q8R1N4 Gm22815-201ENSMUST00000157451 62 ntBASIC0.06□□□□□ -2.4
Nudcd3Q8R1N4 Gm23761-201ENSMUST00000158347 104 ntBASIC0.06□□□□□ -2.4
Nudcd3Q8R1N4 Gm24006-201ENSMUST00000158462 132 ntBASIC0.06□□□□□ -2.4
Nudcd3Q8R1N4 Mir100-201ENSMUST00000175270 80 ntBASIC0.06□□□□□ -2.4
Nudcd3Q8R1N4 Gm37330-201ENSMUST00000192606 153 ntBASIC0.06□□□□□ -2.4
Nudcd3Q8R1N4 Mir670-201ENSMUST00000102380 100 ntBASIC0.05□□□□□ -2.4
Nudcd3Q8R1N4 Mir1197-201ENSMUST00000117037 120 ntBASIC0.05□□□□□ -2.4
Nudcd3Q8R1N4 Gm14039-201ENSMUST00000118705 101 ntBASIC0.05□□□□□ -2.4
Nudcd3Q8R1N4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.05□□□□□ -2.4
Nudcd3Q8R1N4 Mir8116-201ENSMUST00000184134 97 ntBASIC0.05□□□□□ -2.4
Nudcd3Q8R1N4 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.05□□□□□ -2.4
Nudcd3Q8R1N4 Gm28767-201ENSMUST00000188601 114 ntBASIC0.05□□□□□ -2.4
Nudcd3Q8R1N4 Snord95-201ENSMUST00000082846 68 ntBASIC0.05□□□□□ -2.4
Nudcd3Q8R1N4 Mir8107-201ENSMUST00000184024 117 ntBASIC0.04□□□□□ -2.4
Nudcd3Q8R1N4 Gm37715-201ENSMUST00000193206 235 ntBASIC0.04□□□□□ -2.4
Nudcd3Q8R1N4 Gm24208-201ENSMUST00000082783 135 ntBASIC0.04□□□□□ -2.4
Nudcd3Q8R1N4 Gm25703-201ENSMUST00000083123 151 ntBASIC0.04□□□□□ -2.4
Nudcd3Q8R1N4 Gm23466-201ENSMUST00000157133 106 ntBASIC0.03□□□□□ -2.4
Nudcd3Q8R1N4 Gm22431-201ENSMUST00000158545 107 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 287.6 ms