Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm22704-201ENSMUST00000083027 137 ntBASIC1.3□□□□□ -2.2
Atg4aQ8C9S8 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Atg4aQ8C9S8 Snord13-201ENSMUST00000157627 104 ntBASIC1.29□□□□□ -2.2
Atg4aQ8C9S8 Gm25771-201ENSMUST00000158565 144 ntBASIC1.29□□□□□ -2.2
Atg4aQ8C9S8 Gm22929-201ENSMUST00000175517 107 ntBASIC1.29□□□□□ -2.2
Atg4aQ8C9S8 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Atg4aQ8C9S8 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.29□□□□□ -2.2
Atg4aQ8C9S8 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.29□□□□□ -2.2
Atg4aQ8C9S8 Gm23299-201ENSMUST00000082708 79 ntBASIC1.29□□□□□ -2.2
Atg4aQ8C9S8 Gm23772-201ENSMUST00000104433 102 ntBASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 Gm22790-201ENSMUST00000157229 129 ntBASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 Gm22967-201ENSMUST00000157956 239 ntBASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 Gm22946-201ENSMUST00000158558 82 ntBASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 Gm25949-201ENSMUST00000175333 114 ntBASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 Gm23567-201ENSMUST00000178005 107 ntBASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 Gm27326-201ENSMUST00000183504 95 ntBASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.28□□□□□ -2.2
Atg4aQ8C9S8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
Atg4aQ8C9S8 BC022960-201ENSMUST00000119987 1815 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Mir654-201ENSMUST00000104787 84 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Gm26038-201ENSMUST00000158151 106 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Gm22164-201ENSMUST00000158413 106 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Gm27934-201ENSMUST00000158795 63 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Mir1966-201ENSMUST00000158807 108 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Gm25364-201ENSMUST00000158851 107 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Snora20-201ENSMUST00000082703 128 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Mir201-201ENSMUST00000083470 66 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Mir451a-201ENSMUST00000093557 72 ntBASIC1.27□□□□□ -2.21
Atg4aQ8C9S8 Mir653-201ENSMUST00000102402 85 ntBASIC1.26□□□□□ -2.21
Atg4aQ8C9S8 Gm26090-201ENSMUST00000157897 128 ntBASIC1.26□□□□□ -2.21
Atg4aQ8C9S8 Mir7039-201ENSMUST00000183852 85 ntBASIC1.26□□□□□ -2.21
Atg4aQ8C9S8 Gm44338-201ENSMUST00000198614 110 ntBASIC1.26□□□□□ -2.21
Atg4aQ8C9S8 Gm25588-201ENSMUST00000082501 140 ntBASIC1.26□□□□□ -2.21
Atg4aQ8C9S8 Gm26326-201ENSMUST00000083070 129 ntBASIC1.26□□□□□ -2.21
Atg4aQ8C9S8 Gm14923-201ENSMUST00000118270 155 ntBASIC1.25□□□□□ -2.21
Atg4aQ8C9S8 Gm23106-201ENSMUST00000157554 101 ntBASIC1.25□□□□□ -2.21
Atg4aQ8C9S8 Gm23267-201ENSMUST00000178490 132 ntBASIC1.25□□□□□ -2.21
Atg4aQ8C9S8 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.25□□□□□ -2.21
Atg4aQ8C9S8 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.25□□□□□ -2.21
Atg4aQ8C9S8 Gm24494-201ENSMUST00000083804 81 ntBASIC1.25□□□□□ -2.21
Atg4aQ8C9S8 Mir489-201ENSMUST00000093599 107 ntBASIC1.25□□□□□ -2.21
Atg4aQ8C9S8 Mir1904-201ENSMUST00000122702 80 ntBASIC1.24□□□□□ -2.21
Atg4aQ8C9S8 Gm22802-201ENSMUST00000175621 89 ntBASIC1.24□□□□□ -2.21
Atg4aQ8C9S8 Gm22862-201ENSMUST00000178593 121 ntBASIC1.24□□□□□ -2.21
Atg4aQ8C9S8 Gm42988-201ENSMUST00000198116 225 ntBASIC1.24□□□□□ -2.21
Atg4aQ8C9S8 Gm44976-201ENSMUST00000205543 261 ntBASIC1.24□□□□□ -2.21
Atg4aQ8C9S8 Gm24232-201ENSMUST00000104314 132 ntBASIC1.23□□□□□ -2.21
Atg4aQ8C9S8 Traj60-201ENSMUST00000167781 54 ntBASIC1.23□□□□□ -2.21
Atg4aQ8C9S8 Gm22699-201ENSMUST00000175376 105 ntBASIC1.23□□□□□ -2.21
Atg4aQ8C9S8 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Atg4aQ8C9S8 Mir6962-201ENSMUST00000199512 63 ntBASIC1.23□□□□□ -2.21
Atg4aQ8C9S8 Gm45471-201ENSMUST00000211270 281 ntBASIC1.23□□□□□ -2.21
Atg4aQ8C9S8 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm22559-201ENSMUST00000157329 134 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm25769-201ENSMUST00000158569 127 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm24054-201ENSMUST00000158619 105 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm22139-201ENSMUST00000158747 105 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm24880-201ENSMUST00000158776 85 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm25838-201ENSMUST00000158920 120 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm16539-201ENSMUST00000160086 327 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm17020-201ENSMUST00000172274 274 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm43381-201ENSMUST00000198553 165 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm43749-201ENSMUST00000199345 352 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Snord96a-201ENSMUST00000082791 81 ntBASIC1.22□□□□□ -2.21
Atg4aQ8C9S8 Gm22785-201ENSMUST00000104087 132 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm11857-201ENSMUST00000119817 324 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm25663-201ENSMUST00000157698 135 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm22551-201ENSMUST00000157795 103 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm24942-201ENSMUST00000158328 114 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm22200-201ENSMUST00000158614 67 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm23337-201ENSMUST00000158959 118 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Mir7009-201ENSMUST00000184519 64 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm28862-201ENSMUST00000188246 163 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm45268-201ENSMUST00000210046 370 ntBASIC1.21□□□□□ -2.22
Atg4aQ8C9S8 Gm25495-201ENSMUST00000104431 131 ntBASIC1.2□□□□□ -2.22
Atg4aQ8C9S8 Gm23907-201ENSMUST00000104595 189 ntBASIC1.2□□□□□ -2.22
Atg4aQ8C9S8 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.2□□□□□ -2.22
Atg4aQ8C9S8 Gm44483-201ENSMUST00000197203 97 ntBASIC1.2□□□□□ -2.22
Atg4aQ8C9S8 Gm8219-201ENSMUST00000218309 242 ntBASIC1.2□□□□□ -2.22
Atg4aQ8C9S8 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.2□□□□□ -2.22
Atg4aQ8C9S8 Snord61-201ENSMUST00000083176 71 ntBASIC1.2□□□□□ -2.22
Atg4aQ8C9S8 Gm25136-201ENSMUST00000083253 115 ntBASIC1.2□□□□□ -2.22
Atg4aQ8C9S8 Gm24588-201ENSMUST00000116696 83 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 Mir6380-201ENSMUST00000184334 81 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 Gm28256-201ENSMUST00000188953 139 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 Gm28559-201ENSMUST00000190532 139 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 Gm44358-201ENSMUST00000196301 98 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 Gm22576-201ENSMUST00000083733 104 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 Gm25650-201ENSMUST00000083784 162 ntBASIC1.19□□□□□ -2.22
Atg4aQ8C9S8 Gm25759-201ENSMUST00000103988 129 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm26076-201ENSMUST00000104065 105 ntBASIC1.18□□□□□ -2.22
Atg4aQ8C9S8 Gm26420-201ENSMUST00000104273 103 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms