Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.18□□□□□ -2.44
Trub1Q8C0D0 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.18□□□□□ -2.44
Trub1Q8C0D0 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Rny3-201ENSMUST00000083011 102 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Mir377-201ENSMUST00000083504 68 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.19□□□□□ -2.44
Trub1Q8C0D0 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.2□□□□□ -2.44
Trub1Q8C0D0 Mir7093-201ENSMUST00000184195 101 ntBASIC-0.2□□□□□ -2.44
Trub1Q8C0D0 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.2□□□□□ -2.44
Trub1Q8C0D0 AC154296.2-201ENSMUST00000214696 545 ntBASIC-0.2□□□□□ -2.44
Trub1Q8C0D0 AC167192.1-201ENSMUST00000225908 139 ntBASIC-0.2□□□□□ -2.44
Trub1Q8C0D0 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.2□□□□□ -2.44
Trub1Q8C0D0 Snord85-201ENSMUST00000083262 73 ntBASIC-0.2□□□□□ -2.44
Trub1Q8C0D0 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.2□□□□□ -2.44
Trub1Q8C0D0 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.21□□□□□ -2.44
Trub1Q8C0D0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.21□□□□□ -2.44
Trub1Q8C0D0 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.21□□□□□ -2.44
Trub1Q8C0D0 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.21□□□□□ -2.44
Trub1Q8C0D0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.21□□□□□ -2.44
Trub1Q8C0D0 Mir721-201ENSMUST00000200230 88 ntBASIC-0.21□□□□□ -2.44
Trub1Q8C0D0 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.21□□□□□ -2.44
Trub1Q8C0D0 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.21□□□□□ -2.44
Trub1Q8C0D0 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.22□□□□□ -2.44
Trub1Q8C0D0 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.22□□□□□ -2.44
Trub1Q8C0D0 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.22□□□□□ -2.44
Trub1Q8C0D0 AC108945.1-201ENSMUST00000226477 94 ntBASIC-0.22□□□□□ -2.44
Trub1Q8C0D0 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.22□□□□□ -2.44
Trub1Q8C0D0 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.22□□□□□ -2.44
Trub1Q8C0D0 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Gm12748-201ENSMUST00000120763 504 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.23□□□□□ -2.45
Trub1Q8C0D0 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.24□□□□□ -2.45
Trub1Q8C0D0 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Mir669p-2-201ENSMUST00000103868 87 ntBASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Mir669p-1-201ENSMUST00000103884 87 ntBASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Gm27723-201ENSMUST00000157398 63 ntBASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Gm29665-201ENSMUST00000191457 528 ntBASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Trub1Q8C0D0 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm27317-201ENSMUST00000183533 95 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.26□□□□□ -2.45
Trub1Q8C0D0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
Trub1Q8C0D0 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.27□□□□□ -2.45
Trub1Q8C0D0 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.27□□□□□ -2.45
Trub1Q8C0D0 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.27□□□□□ -2.45
Trub1Q8C0D0 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.27□□□□□ -2.45
Trub1Q8C0D0 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.27□□□□□ -2.45
Trub1Q8C0D0 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.27□□□□□ -2.45
Trub1Q8C0D0 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.27□□□□□ -2.45
Trub1Q8C0D0 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm26255-201ENSMUST00000122492 103 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm24498-201ENSMUST00000158445 102 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm26401-201ENSMUST00000158502 76 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm28489-201ENSMUST00000186655 316 ntBASIC-0.28□□□□□ -2.45
Trub1Q8C0D0 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 230.7 ms