Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm27521-201ENSMUST00000184022 64 ntBASIC0.17□□□□□ -2.38
Ccdc40Q8BI79 Gm22686-201ENSMUST00000082847 100 ntBASIC0.17□□□□□ -2.38
Ccdc40Q8BI79 Gm10222-201ENSMUST00000088336 294 ntBASIC0.17□□□□□ -2.38
Ccdc40Q8BI79 Gm22815-201ENSMUST00000157451 62 ntBASIC0.16□□□□□ -2.38
Ccdc40Q8BI79 Gm23838-201ENSMUST00000158067 162 ntBASIC0.16□□□□□ -2.38
Ccdc40Q8BI79 Gm26287-201ENSMUST00000158887 81 ntBASIC0.16□□□□□ -2.38
Ccdc40Q8BI79 Mir3108-201ENSMUST00000175500 79 ntBASIC0.16□□□□□ -2.38
Ccdc40Q8BI79 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.16□□□□□ -2.38
Ccdc40Q8BI79 Gm16186-201ENSMUST00000120132 216 ntBASIC0.15□□□□□ -2.39
Ccdc40Q8BI79 Gm24500-201ENSMUST00000158447 124 ntBASIC0.15□□□□□ -2.39
Ccdc40Q8BI79 Gm44457-201ENSMUST00000198109 76 ntBASIC0.15□□□□□ -2.39
Ccdc40Q8BI79 Gm25634-201ENSMUST00000082667 105 ntBASIC0.15□□□□□ -2.39
Ccdc40Q8BI79 Mir344-201ENSMUST00000083634 95 ntBASIC0.15□□□□□ -2.39
Ccdc40Q8BI79 Gm22784-201ENSMUST00000104088 132 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Gm22080-201ENSMUST00000157591 106 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Gm23219-201ENSMUST00000158123 87 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Gm25952-201ENSMUST00000175329 74 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Mir6390-201ENSMUST00000184405 129 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Gm44977-201ENSMUST00000205283 420 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Gm23406-201ENSMUST00000082537 122 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Snord95-201ENSMUST00000082846 68 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 Mir224-201ENSMUST00000083608 82 ntBASIC0.14□□□□□ -2.39
Ccdc40Q8BI79 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.13□□□□□ -2.39
Ccdc40Q8BI79 Gm24392-201ENSMUST00000158136 103 ntBASIC0.13□□□□□ -2.39
Ccdc40Q8BI79 Gm24728-201ENSMUST00000158226 125 ntBASIC0.13□□□□□ -2.39
Ccdc40Q8BI79 Gm24667-201ENSMUST00000158938 103 ntBASIC0.13□□□□□ -2.39
Ccdc40Q8BI79 Gm28008-201ENSMUST00000184021 186 ntBASIC0.13□□□□□ -2.39
Ccdc40Q8BI79 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.13□□□□□ -2.39
Ccdc40Q8BI79 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.13□□□□□ -2.39
Ccdc40Q8BI79 Gm25416-201ENSMUST00000104221 107 ntBASIC0.12□□□□□ -2.39
Ccdc40Q8BI79 Gm25664-201ENSMUST00000157697 107 ntBASIC0.12□□□□□ -2.39
Ccdc40Q8BI79 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Ccdc40Q8BI79 Gm22753-201ENSMUST00000083657 107 ntBASIC0.11□□□□□ -2.39
Ccdc40Q8BI79 Gm23301-201ENSMUST00000082713 65 ntBASIC0.1□□□□□ -2.39
Ccdc40Q8BI79 Gm24423-201ENSMUST00000101982 106 ntBASIC0.09□□□□□ -2.4
Ccdc40Q8BI79 Gm26402-201ENSMUST00000158499 113 ntBASIC0.09□□□□□ -2.4
Ccdc40Q8BI79 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.09□□□□□ -2.4
Ccdc40Q8BI79 Gm24342-201ENSMUST00000103907 104 ntBASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Gm23126-201ENSMUST00000104260 134 ntBASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Gm25848-201ENSMUST00000116790 144 ntBASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Gm25828-201ENSMUST00000157087 95 ntBASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Gm25444-201ENSMUST00000158999 113 ntBASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Mir7229-201ENSMUST00000197062 53 ntBASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Mir219b-201ENSMUST00000198317 65 ntBASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Gm45313-201ENSMUST00000210584 178 ntBASIC0.08□□□□□ -2.4
Ccdc40Q8BI79 Gm25611-201ENSMUST00000104017 133 ntBASIC0.07□□□□□ -2.4
Ccdc40Q8BI79 Gm12797-201ENSMUST00000118645 273 ntBASIC0.07□□□□□ -2.4
Ccdc40Q8BI79 Gm11204-201ENSMUST00000122438 147 ntBASIC0.07□□□□□ -2.4
Ccdc40Q8BI79 Gm22520-201ENSMUST00000158269 129 ntBASIC0.07□□□□□ -2.4
Ccdc40Q8BI79 Mir100-201ENSMUST00000175270 80 ntBASIC0.07□□□□□ -2.4
Ccdc40Q8BI79 Gm25235-201ENSMUST00000179933 107 ntBASIC0.07□□□□□ -2.4
Ccdc40Q8BI79 Gm27672-201ENSMUST00000183751 204 ntBASIC0.07□□□□□ -2.4
Ccdc40Q8BI79 Gm27943-201ENSMUST00000184844 116 ntBASIC0.07□□□□□ -2.4
Ccdc40Q8BI79 Gm24006-201ENSMUST00000158462 132 ntBASIC0.06□□□□□ -2.4
Ccdc40Q8BI79 Mir7077-201ENSMUST00000183991 57 ntBASIC0.06□□□□□ -2.4
Ccdc40Q8BI79 Gm37330-201ENSMUST00000192606 153 ntBASIC0.06□□□□□ -2.4
Ccdc40Q8BI79 Rny1-201ENSMUST00000083767 112 ntBASIC0.06□□□□□ -2.4
Ccdc40Q8BI79 Mir532-201ENSMUST00000093630 96 ntBASIC0.06□□□□□ -2.4
Ccdc40Q8BI79 Gm12924-201ENSMUST00000121747 318 ntBASIC0.05□□□□□ -2.4
Ccdc40Q8BI79 Gm23761-201ENSMUST00000158347 104 ntBASIC0.05□□□□□ -2.4
Ccdc40Q8BI79 Gm24415-201ENSMUST00000180218 107 ntBASIC0.05□□□□□ -2.4
Ccdc40Q8BI79 Gm27993-201ENSMUST00000184362 85 ntBASIC0.05□□□□□ -2.4
Ccdc40Q8BI79 Gm26076-201ENSMUST00000104065 105 ntBASIC0.04□□□□□ -2.4
Ccdc40Q8BI79 Gm25771-201ENSMUST00000158565 144 ntBASIC0.04□□□□□ -2.4
Ccdc40Q8BI79 Gm25718-201ENSMUST00000158632 118 ntBASIC0.04□□□□□ -2.4
Ccdc40Q8BI79 Gm26159-201ENSMUST00000158968 104 ntBASIC0.04□□□□□ -2.4
Ccdc40Q8BI79 Snord82-201ENSMUST00000082889 70 ntBASIC0.04□□□□□ -2.4
Ccdc40Q8BI79 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm24575-201ENSMUST00000175502 77 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm25935-201ENSMUST00000178746 107 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm28767-201ENSMUST00000188601 114 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm29140-201ENSMUST00000190187 476 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm37715-201ENSMUST00000193206 235 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm44308-201ENSMUST00000197080 99 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm44468-201ENSMUST00000199516 105 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.03□□□□□ -2.4
Ccdc40Q8BI79 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm11904-201ENSMUST00000120562 248 ntBASIC0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm27402-201ENSMUST00000183890 120 ntBASIC0.02□□□□□ -2.41
Ccdc40Q8BI79 Mir8107-201ENSMUST00000184024 117 ntBASIC0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm27747-201ENSMUST00000184707 85 ntBASIC0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm44455-201ENSMUST00000200061 82 ntBASIC0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Ccdc40Q8BI79 Gm22149-201ENSMUST00000104442 136 ntBASIC0.01□□□□□ -2.41
Ccdc40Q8BI79 Mir1197-201ENSMUST00000117037 120 ntBASIC0.01□□□□□ -2.41
Ccdc40Q8BI79 Gm6952-201ENSMUST00000118629 159 ntBASIC0.01□□□□□ -2.41
Ccdc40Q8BI79 Gm22431-201ENSMUST00000158545 107 ntBASIC0.01□□□□□ -2.41
Ccdc40Q8BI79 Gm23821-201ENSMUST00000158738 106 ntBASIC0.01□□□□□ -2.41
Ccdc40Q8BI79 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.01□□□□□ -2.41
Ccdc40Q8BI79 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.01□□□□□ -2.41
Ccdc40Q8BI79 Gm24208-201ENSMUST00000082783 135 ntBASIC0.01□□□□□ -2.41
Ccdc40Q8BI79 Gm25111-201ENSMUST00000116686 147 ntBASIC0□□□□□ -2.41
Ccdc40Q8BI79 Gm16550-201ENSMUST00000162550 126 ntBASIC0□□□□□ -2.41
Ccdc40Q8BI79 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0□□□□□ -2.41
Ccdc40Q8BI79 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0□□□□□ -2.41
Ccdc40Q8BI79 AL627387.1-201ENSMUST00000226063 250 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 172.4 ms