Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Mir382-201ENSMUST00000083494 76 ntBASIC-0.03□□□□□ -2.41
Clrn3Q8BHH8 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.04□□□□□ -2.42
Clrn3Q8BHH8 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.04□□□□□ -2.42
Clrn3Q8BHH8 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-0.04□□□□□ -2.42
Clrn3Q8BHH8 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.04□□□□□ -2.42
Clrn3Q8BHH8 Mir532-201ENSMUST00000093630 96 ntBASIC-0.04□□□□□ -2.42
Clrn3Q8BHH8 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Mir411-201ENSMUST00000083543 82 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm22753-201ENSMUST00000083657 107 ntBASIC-0.05□□□□□ -2.42
Clrn3Q8BHH8 Gm24278-201ENSMUST00000104239 127 ntBASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Clrn3Q8BHH8 Mir100-201ENSMUST00000175270 80 ntBASIC-0.07□□□□□ -2.42
Clrn3Q8BHH8 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-0.07□□□□□ -2.42
Clrn3Q8BHH8 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.07□□□□□ -2.42
Clrn3Q8BHH8 Gm22364-201ENSMUST00000083097 98 ntBASIC-0.07□□□□□ -2.42
Clrn3Q8BHH8 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.08□□□□□ -2.42
Clrn3Q8BHH8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-0.09□□□□□ -2.42
Clrn3Q8BHH8 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.09□□□□□ -2.42
Clrn3Q8BHH8 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.09□□□□□ -2.42
Clrn3Q8BHH8 Gm44858-201ENSMUST00000207360 154 ntBASIC-0.09□□□□□ -2.42
Clrn3Q8BHH8 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.09□□□□□ -2.42
Clrn3Q8BHH8 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.09□□□□□ -2.42
Clrn3Q8BHH8 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.1□□□□□ -2.43
Clrn3Q8BHH8 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.1□□□□□ -2.43
Clrn3Q8BHH8 Mir5624-201ENSMUST00000176635 61 ntBASIC-0.1□□□□□ -2.43
Clrn3Q8BHH8 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.1□□□□□ -2.43
Clrn3Q8BHH8 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.1□□□□□ -2.43
Clrn3Q8BHH8 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.1□□□□□ -2.43
Clrn3Q8BHH8 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.11□□□□□ -2.43
Clrn3Q8BHH8 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.11□□□□□ -2.43
Clrn3Q8BHH8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.11□□□□□ -2.43
Clrn3Q8BHH8 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
Clrn3Q8BHH8 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.11□□□□□ -2.43
Clrn3Q8BHH8 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.11□□□□□ -2.43
Clrn3Q8BHH8 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.11□□□□□ -2.43
Clrn3Q8BHH8 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.11□□□□□ -2.43
Clrn3Q8BHH8 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Gm25024-201ENSMUST00000179667 104 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.12□□□□□ -2.43
Clrn3Q8BHH8 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.13□□□□□ -2.43
Clrn3Q8BHH8 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.13□□□□□ -2.43
Clrn3Q8BHH8 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.13□□□□□ -2.43
Clrn3Q8BHH8 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.13□□□□□ -2.43
Clrn3Q8BHH8 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.13□□□□□ -2.43
Clrn3Q8BHH8 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.13□□□□□ -2.43
Clrn3Q8BHH8 Gm22448-201ENSMUST00000179254 107 ntBASIC-0.14□□□□□ -2.43
Clrn3Q8BHH8 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.14□□□□□ -2.43
Clrn3Q8BHH8 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.14□□□□□ -2.43
Clrn3Q8BHH8 Mir721-201ENSMUST00000200230 88 ntBASIC-0.14□□□□□ -2.43
Clrn3Q8BHH8 Mir377-201ENSMUST00000083504 68 ntBASIC-0.14□□□□□ -2.43
Clrn3Q8BHH8 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Clrn3Q8BHH8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.15□□□□□ -2.43
Clrn3Q8BHH8 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.15□□□□□ -2.43
Clrn3Q8BHH8 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.15□□□□□ -2.43
Clrn3Q8BHH8 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.15□□□□□ -2.43
Clrn3Q8BHH8 Gm37404-201ENSMUST00000195726 359 ntBASIC-0.15□□□□□ -2.43
Clrn3Q8BHH8 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-0.15□□□□□ -2.43
Clrn3Q8BHH8 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.15□□□□□ -2.43
Clrn3Q8BHH8 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.16□□□□□ -2.44
Clrn3Q8BHH8 Gm24737-201ENSMUST00000158861 100 ntBASIC-0.16□□□□□ -2.44
Clrn3Q8BHH8 Gm26287-201ENSMUST00000158887 81 ntBASIC-0.16□□□□□ -2.44
Clrn3Q8BHH8 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms