Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Snord96a-201ENSMUST00000082791 81 ntBASIC1.48□□□□□ -2.17
Ubfd1Q78JW9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.47□□□□□ -2.17
Ubfd1Q78JW9 Gm25663-201ENSMUST00000157698 135 ntBASIC1.47□□□□□ -2.17
Ubfd1Q78JW9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.47□□□□□ -2.17
Ubfd1Q78JW9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.47□□□□□ -2.17
Ubfd1Q78JW9 Gm28794-201ENSMUST00000185276 136 ntBASIC1.47□□□□□ -2.17
Ubfd1Q78JW9 Gm44338-201ENSMUST00000198614 110 ntBASIC1.47□□□□□ -2.17
Ubfd1Q78JW9 Gm44976-201ENSMUST00000205543 261 ntBASIC1.47□□□□□ -2.17
Ubfd1Q78JW9 Gm24232-201ENSMUST00000104314 132 ntBASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 Gm26049-201ENSMUST00000157313 108 ntBASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 Gm24880-201ENSMUST00000158776 85 ntBASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 Gm27326-201ENSMUST00000183504 95 ntBASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 Gm28862-201ENSMUST00000188246 163 ntBASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 Gm8219-201ENSMUST00000218309 242 ntBASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Ubfd1Q78JW9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ubfd1Q78JW9 Gm22785-201ENSMUST00000104087 132 ntBASIC1.45□□□□□ -2.18
Ubfd1Q78JW9 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.45□□□□□ -2.18
Ubfd1Q78JW9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.45□□□□□ -2.18
Ubfd1Q78JW9 Gm25838-201ENSMUST00000158920 120 ntBASIC1.45□□□□□ -2.18
Ubfd1Q78JW9 Gm43381-201ENSMUST00000198553 165 ntBASIC1.45□□□□□ -2.18
Ubfd1Q78JW9 Gm25650-201ENSMUST00000083784 162 ntBASIC1.45□□□□□ -2.18
Ubfd1Q78JW9 Gm22200-201ENSMUST00000158614 67 ntBASIC1.44□□□□□ -2.18
Ubfd1Q78JW9 Gm24054-201ENSMUST00000158619 105 ntBASIC1.44□□□□□ -2.18
Ubfd1Q78JW9 Gm17020-201ENSMUST00000172274 274 ntBASIC1.44□□□□□ -2.18
Ubfd1Q78JW9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Ubfd1Q78JW9 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.44□□□□□ -2.18
Ubfd1Q78JW9 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.44□□□□□ -2.18
Ubfd1Q78JW9 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.43□□□□□ -2.18
Ubfd1Q78JW9 Gm24379-201ENSMUST00000122695 86 ntBASIC1.43□□□□□ -2.18
Ubfd1Q78JW9 Gm25769-201ENSMUST00000158569 127 ntBASIC1.43□□□□□ -2.18
Ubfd1Q78JW9 Gm16539-201ENSMUST00000160086 327 ntBASIC1.43□□□□□ -2.18
Ubfd1Q78JW9 Traj60-201ENSMUST00000167781 54 ntBASIC1.43□□□□□ -2.18
Ubfd1Q78JW9 Mir489-201ENSMUST00000093599 107 ntBASIC1.43□□□□□ -2.18
Ubfd1Q78JW9 Gm26018-201ENSMUST00000104406 128 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm24588-201ENSMUST00000116696 83 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm23122-201ENSMUST00000157645 103 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm28256-201ENSMUST00000188953 139 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm28559-201ENSMUST00000190532 139 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm44358-201ENSMUST00000196301 98 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm43749-201ENSMUST00000199345 352 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm25136-201ENSMUST00000083253 115 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm22576-201ENSMUST00000083733 104 ntBASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Ubfd1Q78JW9 Gm23060-201ENSMUST00000102345 109 ntBASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Gm26076-201ENSMUST00000104065 105 ntBASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Gm23320-201ENSMUST00000104462 127 ntBASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Gm22373-201ENSMUST00000104584 89 ntBASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Gm22105-201ENSMUST00000116734 116 ntBASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Gm23337-201ENSMUST00000158959 118 ntBASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Gm22914-201ENSMUST00000175195 77 ntBASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Ubfd1Q78JW9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
Ubfd1Q78JW9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm26420-201ENSMUST00000104273 103 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm12309-201ENSMUST00000119889 182 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm22999-201ENSMUST00000157082 88 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm24915-201ENSMUST00000157288 78 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm25044-201ENSMUST00000158603 104 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Snora24-201ENSMUST00000174989 130 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm18665-201ENSMUST00000189783 270 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Snord61-201ENSMUST00000083176 71 ntBASIC1.4□□□□□ -2.19
Ubfd1Q78JW9 Gm26082-201ENSMUST00000104070 127 ntBASIC1.39□□□□□ -2.19
Ubfd1Q78JW9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.39□□□□□ -2.19
Ubfd1Q78JW9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.39□□□□□ -2.19
Ubfd1Q78JW9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.39□□□□□ -2.19
Ubfd1Q78JW9 Gm16976-205ENSMUST00000227324 226 ntBASIC1.39□□□□□ -2.19
Ubfd1Q78JW9 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm14568-201ENSMUST00000119321 294 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm25980-201ENSMUST00000157176 218 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm24250-201ENSMUST00000157320 135 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm23375-201ENSMUST00000175407 83 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm23770-201ENSMUST00000178009 108 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm22832-201ENSMUST00000178022 108 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm23863-201ENSMUST00000178265 108 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm24828-201ENSMUST00000178507 108 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm23052-201ENSMUST00000178633 108 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm25729-201ENSMUST00000179050 108 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm25359-201ENSMUST00000179315 108 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm22624-201ENSMUST00000179913 108 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm20734-201ENSMUST00000216939 193 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.38□□□□□ -2.19
Ubfd1Q78JW9 Gm14502-201ENSMUST00000118154 113 ntBASIC1.37□□□□□ -2.19
Ubfd1Q78JW9 Gm25241-201ENSMUST00000174909 84 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 138 ms