Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm26363-201ENSMUST00000158866 83 ntBASIC1.3□□□□□ -2.2
Smarca1Q6PGB8 Gm22914-201ENSMUST00000175195 77 ntBASIC1.3□□□□□ -2.2
Smarca1Q6PGB8 Gm27672-201ENSMUST00000183751 204 ntBASIC1.3□□□□□ -2.2
Smarca1Q6PGB8 Gm42506-201ENSMUST00000202009 150 ntBASIC1.3□□□□□ -2.2
Smarca1Q6PGB8 Gm45471-201ENSMUST00000211270 281 ntBASIC1.3□□□□□ -2.2
Smarca1Q6PGB8 Gm22980-201ENSMUST00000082608 70 ntBASIC1.3□□□□□ -2.2
Smarca1Q6PGB8 Gm24132-201ENSMUST00000104745 91 ntBASIC1.29□□□□□ -2.2
Smarca1Q6PGB8 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.29□□□□□ -2.2
Smarca1Q6PGB8 Gm26090-201ENSMUST00000157897 128 ntBASIC1.29□□□□□ -2.2
Smarca1Q6PGB8 Gm26089-201ENSMUST00000157898 107 ntBASIC1.29□□□□□ -2.2
Smarca1Q6PGB8 Gm16404-201ENSMUST00000177739 468 ntBASIC1.29□□□□□ -2.2
Smarca1Q6PGB8 Gm14598-201ENSMUST00000180109 468 ntBASIC1.29□□□□□ -2.2
Smarca1Q6PGB8 Gm14625-201ENSMUST00000180231 468 ntBASIC1.29□□□□□ -2.2
Smarca1Q6PGB8 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.29□□□□□ -2.2
Smarca1Q6PGB8 Gm24276-201ENSMUST00000102181 110 ntBASIC1.28□□□□□ -2.2
Smarca1Q6PGB8 Gm6952-201ENSMUST00000118629 159 ntBASIC1.28□□□□□ -2.2
Smarca1Q6PGB8 Gm22074-201ENSMUST00000158595 113 ntBASIC1.28□□□□□ -2.2
Smarca1Q6PGB8 Gm28256-201ENSMUST00000188953 139 ntBASIC1.28□□□□□ -2.2
Smarca1Q6PGB8 Gm28559-201ENSMUST00000190532 139 ntBASIC1.28□□□□□ -2.2
Smarca1Q6PGB8 Gm42988-201ENSMUST00000198116 225 ntBASIC1.28□□□□□ -2.2
Smarca1Q6PGB8 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.27□□□□□ -2.21
Smarca1Q6PGB8 Gm16539-201ENSMUST00000160086 327 ntBASIC1.27□□□□□ -2.21
Smarca1Q6PGB8 Gm27419-201ENSMUST00000184576 109 ntBASIC1.27□□□□□ -2.21
Smarca1Q6PGB8 Mir6985-201ENSMUST00000184641 61 ntBASIC1.27□□□□□ -2.21
Smarca1Q6PGB8 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.27□□□□□ -2.21
Smarca1Q6PGB8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.27□□□□□ -2.21
Smarca1Q6PGB8 Mir186-201ENSMUST00000083497 71 ntBASIC1.27□□□□□ -2.21
Smarca1Q6PGB8 Gm25496-201ENSMUST00000104430 120 ntBASIC1.26□□□□□ -2.21
Smarca1Q6PGB8 Gm12771-201ENSMUST00000120246 135 ntBASIC1.26□□□□□ -2.21
Smarca1Q6PGB8 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.26□□□□□ -2.21
Smarca1Q6PGB8 Gm24342-201ENSMUST00000103907 104 ntBASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 Snord100-201ENSMUST00000116836 74 ntBASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 Gm24942-201ENSMUST00000158328 114 ntBASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 Gm22565-201ENSMUST00000175540 69 ntBASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 Gm44396-201ENSMUST00000199843 114 ntBASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 Mir200b-201ENSMUST00000083615 70 ntBASIC1.25□□□□□ -2.21
Smarca1Q6PGB8 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Smarca1Q6PGB8 Gm14567-201ENSMUST00000117155 174 ntBASIC1.24□□□□□ -2.21
Smarca1Q6PGB8 Gm24015-201ENSMUST00000157725 232 ntBASIC1.24□□□□□ -2.21
Smarca1Q6PGB8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.24□□□□□ -2.21
Smarca1Q6PGB8 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.24□□□□□ -2.21
Smarca1Q6PGB8 Gm25851-201ENSMUST00000082794 107 ntBASIC1.24□□□□□ -2.21
Smarca1Q6PGB8 Mir344-201ENSMUST00000083634 95 ntBASIC1.24□□□□□ -2.21
Smarca1Q6PGB8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.24□□□□□ -2.21
Smarca1Q6PGB8 Snord70-201ENSMUST00000104157 87 ntBASIC1.23□□□□□ -2.21
Smarca1Q6PGB8 Gm13345-201ENSMUST00000121928 228 ntBASIC1.23□□□□□ -2.21
Smarca1Q6PGB8 Gm23852-201ENSMUST00000158376 77 ntBASIC1.23□□□□□ -2.21
Smarca1Q6PGB8 Gm25715-201ENSMUST00000158627 125 ntBASIC1.23□□□□□ -2.21
Smarca1Q6PGB8 Mir7663-201ENSMUST00000183950 61 ntBASIC1.23□□□□□ -2.21
Smarca1Q6PGB8 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Smarca1Q6PGB8 Gm24271-201ENSMUST00000102327 111 ntBASIC1.22□□□□□ -2.21
Smarca1Q6PGB8 Gm24221-201ENSMUST00000158833 313 ntBASIC1.22□□□□□ -2.21
Smarca1Q6PGB8 Gm44458-201ENSMUST00000196594 143 ntBASIC1.22□□□□□ -2.21
Smarca1Q6PGB8 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.22□□□□□ -2.21
Smarca1Q6PGB8 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.22□□□□□ -2.21
Smarca1Q6PGB8 Snora41-201ENSMUST00000082668 132 ntBASIC1.22□□□□□ -2.21
Smarca1Q6PGB8 Gm22809-201ENSMUST00000082743 156 ntBASIC1.22□□□□□ -2.21
Smarca1Q6PGB8 Gm44976-201ENSMUST00000205543 261 ntBASIC1.21□□□□□ -2.22
Smarca1Q6PGB8 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.21□□□□□ -2.22
Smarca1Q6PGB8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Mir1904-201ENSMUST00000122702 80 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Gm22850-201ENSMUST00000157714 82 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Gm22515-201ENSMUST00000158273 305 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Gm25011-201ENSMUST00000158398 126 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Gm25044-201ENSMUST00000158603 104 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Gm22259-201ENSMUST00000178926 107 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Mir6381-201ENSMUST00000183426 87 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Gm37586-201ENSMUST00000193654 204 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.2□□□□□ -2.22
Smarca1Q6PGB8 Mir468-201ENSMUST00000197332 78 ntBASIC1.19□□□□□ -2.22
Smarca1Q6PGB8 Gm43898-201ENSMUST00000204456 424 ntBASIC1.19□□□□□ -2.22
Smarca1Q6PGB8 Gm23130-201ENSMUST00000104252 74 ntBASIC1.18□□□□□ -2.22
Smarca1Q6PGB8 Mir721-201ENSMUST00000200230 88 ntBASIC1.18□□□□□ -2.22
Smarca1Q6PGB8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.18□□□□□ -2.22
Smarca1Q6PGB8 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.18□□□□□ -2.22
Smarca1Q6PGB8 Mir324-201ENSMUST00000083600 89 ntBASIC1.18□□□□□ -2.22
Smarca1Q6PGB8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.18□□□□□ -2.22
Smarca1Q6PGB8 Gm25506-201ENSMUST00000104339 70 ntBASIC1.17□□□□□ -2.22
Smarca1Q6PGB8 Gm25771-201ENSMUST00000158565 144 ntBASIC1.17□□□□□ -2.22
Smarca1Q6PGB8 Mir7091-201ENSMUST00000184075 79 ntBASIC1.17□□□□□ -2.22
Smarca1Q6PGB8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Smarca1Q6PGB8 Gm23375-201ENSMUST00000175407 83 ntBASIC1.16□□□□□ -2.22
Smarca1Q6PGB8 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Smarca1Q6PGB8 Gm27465-201ENSMUST00000184290 91 ntBASIC1.16□□□□□ -2.22
Smarca1Q6PGB8 Mir302d-201ENSMUST00000083513 66 ntBASIC1.16□□□□□ -2.22
Smarca1Q6PGB8 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Smarca1Q6PGB8 Gm27285-201ENSMUST00000183875 127 ntBASIC1.15□□□□□ -2.23
Smarca1Q6PGB8 Gm45002-201ENSMUST00000208045 120 ntBASIC1.15□□□□□ -2.23
Smarca1Q6PGB8 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC1.15□□□□□ -2.23
Smarca1Q6PGB8 Gm22738-201ENSMUST00000083440 147 ntBASIC1.15□□□□□ -2.23
Smarca1Q6PGB8 Mir22-201ENSMUST00000083595 95 ntBASIC1.15□□□□□ -2.23
Smarca1Q6PGB8 Gm22999-201ENSMUST00000157082 88 ntBASIC1.14□□□□□ -2.23
Smarca1Q6PGB8 Mir1961-201ENSMUST00000158643 112 ntBASIC1.14□□□□□ -2.23
Smarca1Q6PGB8 Gm22476-201ENSMUST00000158902 100 ntBASIC1.14□□□□□ -2.23
Smarca1Q6PGB8 Gm18213-201ENSMUST00000207850 178 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 274.8 ms