Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Mir1197-201ENSMUST00000117037 120 ntBASIC0.52□□□□□ -2.33
Usf1Q61069 Gm11322-201ENSMUST00000118095 435 ntBASIC0.52□□□□□ -2.33
Usf1Q61069 Gm24015-201ENSMUST00000157725 232 ntBASIC0.52□□□□□ -2.33
Usf1Q61069 Gm23002-201ENSMUST00000179221 107 ntBASIC0.52□□□□□ -2.33
Usf1Q61069 Gm6272-201ENSMUST00000121256 171 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Gm11204-201ENSMUST00000122438 147 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Gm23655-201ENSMUST00000122627 105 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Gm23579-201ENSMUST00000158528 103 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Gm23581-201ENSMUST00000158531 63 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Mir6389-201ENSMUST00000183661 102 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Gm27980-201ENSMUST00000184094 169 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Gm44464-201ENSMUST00000198010 138 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Usf1Q61069 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Mir216a-201ENSMUST00000083605 72 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Mir500-201ENSMUST00000093600 92 ntBASIC0.51□□□□□ -2.33
Usf1Q61069 Mir669f-201ENSMUST00000103850 121 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 Gm14792-201ENSMUST00000119725 258 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 Gm24724-201ENSMUST00000158230 107 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 Gm23180-201ENSMUST00000158686 125 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 Gm23375-201ENSMUST00000175407 83 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 Mir669k-201ENSMUST00000177742 127 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 Gm25673-201ENSMUST00000179957 127 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.5□□□□□ -2.33
Usf1Q61069 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.5□□□□□ -2.33
Usf1Q61069 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Usf1Q61069 Gm13922-201ENSMUST00000119505 156 ntBASIC0.49□□□□□ -2.33
Usf1Q61069 Gm24635-201ENSMUST00000122712 128 ntBASIC0.49□□□□□ -2.33
Usf1Q61069 Gm26402-201ENSMUST00000158499 113 ntBASIC0.49□□□□□ -2.33
Usf1Q61069 Gm16307-201ENSMUST00000161269 210 ntBASIC0.49□□□□□ -2.33
Usf1Q61069 Gm22801-201ENSMUST00000175624 84 ntBASIC0.49□□□□□ -2.33
Usf1Q61069 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.49□□□□□ -2.33
Usf1Q61069 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm25497-201ENSMUST00000104425 132 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm24594-201ENSMUST00000122502 99 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm23466-201ENSMUST00000157133 106 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm24559-201ENSMUST00000157519 121 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm22767-201ENSMUST00000158365 165 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm37715-201ENSMUST00000193206 235 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm44488-201ENSMUST00000199467 119 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.48□□□□□ -2.33
Usf1Q61069 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Gm22686-201ENSMUST00000082847 100 ntBASIC0.48□□□□□ -2.33
Usf1Q61069 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Usf1Q61069 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Usf1Q61069 Gm25323-201ENSMUST00000122555 103 ntBASIC0.47□□□□□ -2.33
Usf1Q61069 Gm24476-201ENSMUST00000157437 131 ntBASIC0.47□□□□□ -2.33
Usf1Q61069 Gm22522-201ENSMUST00000158271 151 ntBASIC0.47□□□□□ -2.33
Usf1Q61069 Gm25935-201ENSMUST00000178746 107 ntBASIC0.47□□□□□ -2.33
Usf1Q61069 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.47□□□□□ -2.33
Usf1Q61069 Gm23451-201ENSMUST00000083328 122 ntBASIC0.47□□□□□ -2.33
Usf1Q61069 Mir547-201ENSMUST00000102051 78 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Gm22786-201ENSMUST00000104086 122 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Gm25828-201ENSMUST00000157087 95 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Gm23994-201ENSMUST00000158059 88 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Gm23853-201ENSMUST00000158375 104 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Mir1933-201ENSMUST00000158930 88 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Mir6336-201ENSMUST00000183581 130 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Gm24208-201ENSMUST00000082783 135 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Gm22358-201ENSMUST00000082877 122 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Gm25188-201ENSMUST00000083913 122 ntBASIC0.46□□□□□ -2.34
Usf1Q61069 Gm14946-201ENSMUST00000119859 296 ntBASIC0.45□□□□□ -2.34
Usf1Q61069 Gm23672-201ENSMUST00000157471 107 ntBASIC0.45□□□□□ -2.34
Usf1Q61069 Gm24467-201ENSMUST00000157887 126 ntBASIC0.45□□□□□ -2.34
Usf1Q61069 Gm22088-201ENSMUST00000158341 117 ntBASIC0.45□□□□□ -2.34
Usf1Q61069 Gm27289-201ENSMUST00000183341 82 ntBASIC0.45□□□□□ -2.34
Usf1Q61069 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.45□□□□□ -2.34
Usf1Q61069 Gm24527-201ENSMUST00000082920 107 ntBASIC0.45□□□□□ -2.34
Usf1Q61069 Gm25138-201ENSMUST00000083248 136 ntBASIC0.45□□□□□ -2.34
Usf1Q61069 Gm23531-201ENSMUST00000104567 68 ntBASIC0.44□□□□□ -2.34
Usf1Q61069 Gm26484-201ENSMUST00000158018 106 ntBASIC0.44□□□□□ -2.34
Usf1Q61069 Gm25241-201ENSMUST00000174909 84 ntBASIC0.44□□□□□ -2.34
Usf1Q61069 Gm26217-201ENSMUST00000175212 84 ntBASIC0.44□□□□□ -2.34
Usf1Q61069 Mir7077-201ENSMUST00000183991 57 ntBASIC0.44□□□□□ -2.34
Usf1Q61069 Gm11388-201ENSMUST00000120908 159 ntBASIC0.43□□□□□ -2.34
Usf1Q61069 Gm24385-201ENSMUST00000122694 350 ntBASIC0.43□□□□□ -2.34
Usf1Q61069 Gm22887-201ENSMUST00000178586 107 ntBASIC0.43□□□□□ -2.34
Usf1Q61069 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Usf1Q61069 Mir6896-201ENSMUST00000198033 73 ntBASIC0.43□□□□□ -2.34
Usf1Q61069 Gm44828-201ENSMUST00000203745 106 ntBASIC0.43□□□□□ -2.34
Usf1Q61069 Mir30a-201ENSMUST00000083471 71 ntBASIC0.43□□□□□ -2.34
Usf1Q61069 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
Usf1Q61069 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.42□□□□□ -2.34
Usf1Q61069 Gm25882-201ENSMUST00000157784 85 ntBASIC0.42□□□□□ -2.34
Usf1Q61069 Gm24547-201ENSMUST00000158649 149 ntBASIC0.42□□□□□ -2.34
Usf1Q61069 Mir3970-201ENSMUST00000199287 90 ntBASIC0.42□□□□□ -2.34
Usf1Q61069 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.42□□□□□ -2.34
Usf1Q61069 Gm23679-201ENSMUST00000083161 119 ntBASIC0.42□□□□□ -2.34
Usf1Q61069 Mir224-201ENSMUST00000083608 82 ntBASIC0.42□□□□□ -2.34
Usf1Q61069 Gm26293-201ENSMUST00000104170 84 ntBASIC0.41□□□□□ -2.34
Usf1Q61069 Gm23278-201ENSMUST00000157911 143 ntBASIC0.41□□□□□ -2.34
Usf1Q61069 Mir6377-201ENSMUST00000183760 114 ntBASIC0.41□□□□□ -2.34
Usf1Q61069 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.41□□□□□ -2.34
Usf1Q61069 Gm44211-201ENSMUST00000204867 145 ntBASIC0.41□□□□□ -2.34
Usf1Q61069 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 133.5 ms