Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.61□□□□□ -2.51
Trav5d-4Q5R1F6 Gm22598-201ENSMUST00000157600 127 ntBASIC-0.62□□□□□ -2.51
Trav5d-4Q5R1F6 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.62□□□□□ -2.51
Trav5d-4Q5R1F6 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
Trav5d-4Q5R1F6 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.62□□□□□ -2.51
Trav5d-4Q5R1F6 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.62□□□□□ -2.51
Trav5d-4Q5R1F6 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
Trav5d-4Q5R1F6 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.63□□□□□ -2.51
Trav5d-4Q5R1F6 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.63□□□□□ -2.51
Trav5d-4Q5R1F6 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.63□□□□□ -2.51
Trav5d-4Q5R1F6 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.63□□□□□ -2.51
Trav5d-4Q5R1F6 AC192616.1-201ENSMUST00000221922 132 ntBASIC-0.63□□□□□ -2.51
Trav5d-4Q5R1F6 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.63□□□□□ -2.51
Trav5d-4Q5R1F6 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.63□□□□□ -2.51
Trav5d-4Q5R1F6 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.64□□□□□ -2.51
Trav5d-4Q5R1F6 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.64□□□□□ -2.51
Trav5d-4Q5R1F6 Gm26400-201ENSMUST00000175012 85 ntBASIC-0.64□□□□□ -2.51
Trav5d-4Q5R1F6 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.64□□□□□ -2.51
Trav5d-4Q5R1F6 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.65□□□□□ -2.51
Trav5d-4Q5R1F6 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.65□□□□□ -2.51
Trav5d-4Q5R1F6 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.65□□□□□ -2.51
Trav5d-4Q5R1F6 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.65□□□□□ -2.51
Trav5d-4Q5R1F6 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.65□□□□□ -2.51
Trav5d-4Q5R1F6 Gm26495-201ENSMUST00000083152 137 ntBASIC-0.65□□□□□ -2.51
Trav5d-4Q5R1F6 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.66□□□□□ -2.52
Trav5d-4Q5R1F6 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
Trav5d-4Q5R1F6 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.66□□□□□ -2.52
Trav5d-4Q5R1F6 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.66□□□□□ -2.52
Trav5d-4Q5R1F6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.66□□□□□ -2.52
Trav5d-4Q5R1F6 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.66□□□□□ -2.52
Trav5d-4Q5R1F6 AC116589.1-201ENSMUST00000220634 327 ntBASIC-0.66□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.66□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 AC164297.5-201ENSMUST00000224365 198 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Snord60-201ENSMUST00000082834 78 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
Trav5d-4Q5R1F6 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.68□□□□□ -2.52
Trav5d-4Q5R1F6 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.68□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.68□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.68□□□□□ -2.52
Trav5d-4Q5R1F6 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.68□□□□□ -2.52
Trav5d-4Q5R1F6 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.68□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.68□□□□□ -2.52
Trav5d-4Q5R1F6 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.69□□□□□ -2.52
Trav5d-4Q5R1F6 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.69□□□□□ -2.52
Trav5d-4Q5R1F6 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.69□□□□□ -2.52
Trav5d-4Q5R1F6 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.69□□□□□ -2.52
Trav5d-4Q5R1F6 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.69□□□□□ -2.52
Trav5d-4Q5R1F6 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.69□□□□□ -2.52
Trav5d-4Q5R1F6 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.7□□□□□ -2.52
Trav5d-4Q5R1F6 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.7□□□□□ -2.52
Trav5d-4Q5R1F6 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.7□□□□□ -2.52
Trav5d-4Q5R1F6 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.7□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.7□□□□□ -2.52
Trav5d-4Q5R1F6 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.7□□□□□ -2.52
Trav5d-4Q5R1F6 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.7□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.71□□□□□ -2.52
Trav5d-4Q5R1F6 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.71□□□□□ -2.52
Trav5d-4Q5R1F6 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.71□□□□□ -2.52
Trav5d-4Q5R1F6 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.71□□□□□ -2.52
Trav5d-4Q5R1F6 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.71□□□□□ -2.52
Trav5d-4Q5R1F6 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.71□□□□□ -2.52
Trav5d-4Q5R1F6 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.71□□□□□ -2.52
Trav5d-4Q5R1F6 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.71□□□□□ -2.52
Trav5d-4Q5R1F6 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Cfap61-214ENSMUST00000167179 183 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Snora19-201ENSMUST00000082962 132 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.72□□□□□ -2.52
Trav5d-4Q5R1F6 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.73□□□□□ -2.53
Trav5d-4Q5R1F6 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.73□□□□□ -2.53
Trav5d-4Q5R1F6 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.73□□□□□ -2.53
Trav5d-4Q5R1F6 Gm24499-201ENSMUST00000158446 104 ntBASIC-0.73□□□□□ -2.53
Trav5d-4Q5R1F6 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.73□□□□□ -2.53
Trav5d-4Q5R1F6 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.73□□□□□ -2.53
Trav5d-4Q5R1F6 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.73□□□□□ -2.53
Trav5d-4Q5R1F6 Gm25052-201ENSMUST00000122661 158 ntBASIC-0.74□□□□□ -2.53
Trav5d-4Q5R1F6 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.74□□□□□ -2.53
Trav5d-4Q5R1F6 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms