Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm25229-201ENSMUST00000178587 79 ntBASIC4,82□□□□□ -1,64
Trim41Q5NCC3 Mir21c-201ENSMUST00000184910 78 ntBASIC4,82□□□□□ -1,64
Trim41Q5NCC3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC4,82□□□□□ -1,64
Trim41Q5NCC3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC4,81□□□□□ -1,64
Trim41Q5NCC3 Gm25847-201ENSMUST00000116793 96 ntBASIC4,81□□□□□ -1,64
Trim41Q5NCC3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC4,81□□□□□ -1,64
Trim41Q5NCC3 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC4,81□□□□□ -1,64
Trim41Q5NCC3 Snora26-201ENSMUST00000175614 121 ntBASIC4,81□□□□□ -1,64
Trim41Q5NCC3 Mir6237-201ENSMUST00000183808 91 ntBASIC4,81□□□□□ -1,64
Trim41Q5NCC3 Gm6954-201ENSMUST00000117416 225 ntBASIC4,8□□□□□ -1,64
Trim41Q5NCC3 Gm24291-201ENSMUST00000157633 162 ntBASIC4,8□□□□□ -1,64
Trim41Q5NCC3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC4,8□□□□□ -1,64
Trim41Q5NCC3 Gm37290-201ENSMUST00000195775 339 ntBASIC4,8□□□□□ -1,64
Trim41Q5NCC3 AC069074.1-201ENSMUST00000220048 381 ntBASIC4,8□□□□□ -1,64
Trim41Q5NCC3 mt-Tl2-201ENSMUST00000082417 71 ntBASIC4,8□□□□□ -1,64
Trim41Q5NCC3 Gm26458-201ENSMUST00000082832 128 ntBASIC4,8□□□□□ -1,64
Trim41Q5NCC3 Gm24038-201ENSMUST00000082872 159 ntBASIC4,8□□□□□ -1,64
Trim41Q5NCC3 Gm24805-201ENSMUST00000082931 104 ntBASIC4,8□□□□□ -1,64
Trim41Q5NCC3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC4,8□□□□□ -1,64
Trim41Q5NCC3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC4,8□□□□□ -1,64
Trim41Q5NCC3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Gm23203-201ENSMUST00000104374 107 ntBASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Gm26150-201ENSMUST00000157426 151 ntBASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Gm22522-201ENSMUST00000158271 151 ntBASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Mir6353-201ENSMUST00000183596 113 ntBASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC4,79□□□□□ -1,64
Trim41Q5NCC3 AC168056.1-201ENSMUST00000225270 180 ntBASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Gm22622-201ENSMUST00000082870 129 ntBASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC4,79□□□□□ -1,64
Trim41Q5NCC3 Gm22999-201ENSMUST00000157082 88 ntBASIC4,78□□□□□ -1,64
Trim41Q5NCC3 Gm23983-201ENSMUST00000157142 114 ntBASIC4,78□□□□□ -1,64
Trim41Q5NCC3 Gm22535-201ENSMUST00000158174 119 ntBASIC4,78□□□□□ -1,64
Trim41Q5NCC3 Gm27987-201ENSMUST00000184023 93 ntBASIC4,78□□□□□ -1,64
Trim41Q5NCC3 Gm44476-201ENSMUST00000196225 91 ntBASIC4,78□□□□□ -1,64
Trim41Q5NCC3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC4,78□□□□□ -1,64
Trim41Q5NCC3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC4,78□□□□□ -1,64
Trim41Q5NCC3 Gm26080-201ENSMUST00000104069 131 ntBASIC4,77□□□□□ -1,65
Trim41Q5NCC3 Gm25496-201ENSMUST00000104430 120 ntBASIC4,77□□□□□ -1,65
Trim41Q5NCC3 Gm23889-201ENSMUST00000122689 104 ntBASIC4,77□□□□□ -1,65
Trim41Q5NCC3 Gm27639-201ENSMUST00000184937 85 ntBASIC4,77□□□□□ -1,65
Trim41Q5NCC3 Gm8031-201ENSMUST00000213430 626 ntBASIC4,77□□□□□ -1,65
Trim41Q5NCC3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC4,77□□□□□ -1,65
Trim41Q5NCC3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC4,76□□□□□ -1,65
Trim41Q5NCC3 Mir344e-201ENSMUST00000104677 66 ntBASIC4,76□□□□□ -1,65
Trim41Q5NCC3 Gm27369-201ENSMUST00000185182 71 ntBASIC4,76□□□□□ -1,65
Trim41Q5NCC3 Gm44715-201ENSMUST00000209049 3839 ntBASIC4,76□□□□□ -1,65
Trim41Q5NCC3 AC126691.1-201ENSMUST00000226534 202 ntBASIC4,76□□□□□ -1,65
Trim41Q5NCC3 Snord118-201ENSMUST00000082965 135 ntBASIC4,76□□□□□ -1,65
Trim41Q5NCC3 Gm25705-201ENSMUST00000083119 104 ntBASIC4,76□□□□□ -1,65
Trim41Q5NCC3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC4,76□□□□□ -1,65
Trim41Q5NCC3 Gm11333-201ENSMUST00000119479 148 ntBASIC4,75□□□□□ -1,65
Trim41Q5NCC3 Gm24345-201ENSMUST00000158706 124 ntBASIC4,75□□□□□ -1,65
Trim41Q5NCC3 AC122335.1-201ENSMUST00000217587 175 ntBASIC4,75□□□□□ -1,65
Trim41Q5NCC3 mt-Tc-201ENSMUST00000082400 66 ntBASIC4,75□□□□□ -1,65
Trim41Q5NCC3 Gm22245-201ENSMUST00000082479 103 ntBASIC4,75□□□□□ -1,65
Trim41Q5NCC3 Gm37664-201ENSMUST00000194607 3813 ntBASIC4,75□□□□□ -1,65
Trim41Q5NCC3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC4,74□□□□□ -1,65
Trim41Q5NCC3 Mir682-201ENSMUST00000102281 96 ntBASIC4,74□□□□□ -1,65
Trim41Q5NCC3 Gm24000-201ENSMUST00000158063 89 ntBASIC4,74□□□□□ -1,65
Trim41Q5NCC3 Gm24536-201ENSMUST00000083144 107 ntBASIC4,74□□□□□ -1,65
Trim41Q5NCC3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC4,74□□□□□ -1,65
Trim41Q5NCC3 Gm1980-201ENSMUST00000123131 2306 ntBASIC4,73□□□□□ -1,65
Trim41Q5NCC3 Gm11356-201ENSMUST00000118974 192 ntBASIC4,73□□□□□ -1,65
Trim41Q5NCC3 n-R5s189-201ENSMUST00000122675 114 ntBASIC4,73□□□□□ -1,65
Trim41Q5NCC3 Gm23190-201ENSMUST00000180307 64 ntBASIC4,73□□□□□ -1,65
Trim41Q5NCC3 Gm23738-201ENSMUST00000082828 171 ntBASIC4,73□□□□□ -1,65
Trim41Q5NCC3 Mir200b-201ENSMUST00000083615 70 ntBASIC4,73□□□□□ -1,65
Trim41Q5NCC3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC4,72□□□□□ -1,65
Trim41Q5NCC3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4,72□□□□□ -1,65
Trim41Q5NCC3 Snora20-201ENSMUST00000082703 128 ntBASIC4,72□□□□□ -1,65
Trim41Q5NCC3 Gm43473-201ENSMUST00000200442 5997 ntBASIC4,72□□□□□ -1,65
Trim41Q5NCC3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC4,72□□□□□ -1,65
Trim41Q5NCC3 Mir542-201ENSMUST00000102186 85 ntBASIC4,71□□□□□ -1,66
Trim41Q5NCC3 Gm23803-201ENSMUST00000104610 132 ntBASIC4,71□□□□□ -1,66
Trim41Q5NCC3 Gm22677-201ENSMUST00000116977 108 ntBASIC4,71□□□□□ -1,66
Trim41Q5NCC3 Gm11248-201ENSMUST00000119568 201 ntBASIC4,71□□□□□ -1,66
Trim41Q5NCC3 Gm26073-201ENSMUST00000179906 127 ntBASIC4,71□□□□□ -1,66
Trim41Q5NCC3 Gm27698-201ENSMUST00000184060 249 ntBASIC4,71□□□□□ -1,66
Trim41Q5NCC3 Gm42795-201ENSMUST00000198847 76 ntBASIC4,71□□□□□ -1,66
Trim41Q5NCC3 AC159093.2-201ENSMUST00000227881 297 ntBASIC4,71□□□□□ -1,66
Trim41Q5NCC3 Gm22082-201ENSMUST00000157587 161 ntBASIC4,7□□□□□ -1,66
Trim41Q5NCC3 Gm28155-201ENSMUST00000191066 151 ntBASIC4,7□□□□□ -1,66
Trim41Q5NCC3 Gm42807-201ENSMUST00000200141 329 ntBASIC4,7□□□□□ -1,66
Trim41Q5NCC3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC4,7□□□□□ -1,66
Trim41Q5NCC3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC4,69□□□□□ -1,66
Trim41Q5NCC3 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC4,69□□□□□ -1,66
Trim41Q5NCC3 Gm44325-201ENSMUST00000196757 77 ntBASIC4,69□□□□□ -1,66
Trim41Q5NCC3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC4,69□□□□□ -1,66
Trim41Q5NCC3 Gm37566-201ENSMUST00000192363 4355 ntBASIC4,68□□□□□ -1,66
Trim41Q5NCC3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC4,68□□□□□ -1,66
Trim41Q5NCC3 Gm23390-201ENSMUST00000157393 106 ntBASIC4,68□□□□□ -1,66
Trim41Q5NCC3 Gm26369-201ENSMUST00000157825 100 ntBASIC4,68□□□□□ -1,66
Trim41Q5NCC3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC4,68□□□□□ -1,66
Trim41Q5NCC3 Gm25854-201ENSMUST00000082792 72 ntBASIC4,68□□□□□ -1,66
Trim41Q5NCC3 Gm25696-201ENSMUST00000082900 105 ntBASIC4,68□□□□□ -1,66
Trim41Q5NCC3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC4,67□□□□□ -1,66
Retrieved 100 of 76,532 protein–RNA pairs in 90,9 ms