Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm25229-201ENSMUST00000178587 79 ntBASIC4.82□□□□□ -1.64
Trim41Q5NCC3 Mir21c-201ENSMUST00000184910 78 ntBASIC4.82□□□□□ -1.64
Trim41Q5NCC3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim41Q5NCC3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim41Q5NCC3 Gm25847-201ENSMUST00000116793 96 ntBASIC4.81□□□□□ -1.64
Trim41Q5NCC3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC4.81□□□□□ -1.64
Trim41Q5NCC3 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim41Q5NCC3 Snora26-201ENSMUST00000175614 121 ntBASIC4.81□□□□□ -1.64
Trim41Q5NCC3 Mir6237-201ENSMUST00000183808 91 ntBASIC4.81□□□□□ -1.64
Trim41Q5NCC3 Gm6954-201ENSMUST00000117416 225 ntBASIC4.8□□□□□ -1.64
Trim41Q5NCC3 Gm24291-201ENSMUST00000157633 162 ntBASIC4.8□□□□□ -1.64
Trim41Q5NCC3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim41Q5NCC3 Gm37290-201ENSMUST00000195775 339 ntBASIC4.8□□□□□ -1.64
Trim41Q5NCC3 AC069074.1-201ENSMUST00000220048 381 ntBASIC4.8□□□□□ -1.64
Trim41Q5NCC3 mt-Tl2-201ENSMUST00000082417 71 ntBASIC4.8□□□□□ -1.64
Trim41Q5NCC3 Gm26458-201ENSMUST00000082832 128 ntBASIC4.8□□□□□ -1.64
Trim41Q5NCC3 Gm24038-201ENSMUST00000082872 159 ntBASIC4.8□□□□□ -1.64
Trim41Q5NCC3 Gm24805-201ENSMUST00000082931 104 ntBASIC4.8□□□□□ -1.64
Trim41Q5NCC3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Trim41Q5NCC3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim41Q5NCC3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Gm23203-201ENSMUST00000104374 107 ntBASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Gm26150-201ENSMUST00000157426 151 ntBASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Gm22522-201ENSMUST00000158271 151 ntBASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Mir6353-201ENSMUST00000183596 113 ntBASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Trim41Q5NCC3 AC168056.1-201ENSMUST00000225270 180 ntBASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Gm22622-201ENSMUST00000082870 129 ntBASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim41Q5NCC3 Gm22999-201ENSMUST00000157082 88 ntBASIC4.78□□□□□ -1.64
Trim41Q5NCC3 Gm23983-201ENSMUST00000157142 114 ntBASIC4.78□□□□□ -1.64
Trim41Q5NCC3 Gm22535-201ENSMUST00000158174 119 ntBASIC4.78□□□□□ -1.64
Trim41Q5NCC3 Gm27987-201ENSMUST00000184023 93 ntBASIC4.78□□□□□ -1.64
Trim41Q5NCC3 Gm44476-201ENSMUST00000196225 91 ntBASIC4.78□□□□□ -1.64
Trim41Q5NCC3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim41Q5NCC3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim41Q5NCC3 Gm26080-201ENSMUST00000104069 131 ntBASIC4.77□□□□□ -1.65
Trim41Q5NCC3 Gm25496-201ENSMUST00000104430 120 ntBASIC4.77□□□□□ -1.65
Trim41Q5NCC3 Gm23889-201ENSMUST00000122689 104 ntBASIC4.77□□□□□ -1.65
Trim41Q5NCC3 Gm27639-201ENSMUST00000184937 85 ntBASIC4.77□□□□□ -1.65
Trim41Q5NCC3 Gm8031-201ENSMUST00000213430 626 ntBASIC4.77□□□□□ -1.65
Trim41Q5NCC3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Trim41Q5NCC3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Trim41Q5NCC3 Mir344e-201ENSMUST00000104677 66 ntBASIC4.76□□□□□ -1.65
Trim41Q5NCC3 Gm27369-201ENSMUST00000185182 71 ntBASIC4.76□□□□□ -1.65
Trim41Q5NCC3 Gm44715-201ENSMUST00000209049 3839 ntBASIC4.76□□□□□ -1.65
Trim41Q5NCC3 AC126691.1-201ENSMUST00000226534 202 ntBASIC4.76□□□□□ -1.65
Trim41Q5NCC3 Snord118-201ENSMUST00000082965 135 ntBASIC4.76□□□□□ -1.65
Trim41Q5NCC3 Gm25705-201ENSMUST00000083119 104 ntBASIC4.76□□□□□ -1.65
Trim41Q5NCC3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim41Q5NCC3 Gm11333-201ENSMUST00000119479 148 ntBASIC4.75□□□□□ -1.65
Trim41Q5NCC3 Gm24345-201ENSMUST00000158706 124 ntBASIC4.75□□□□□ -1.65
Trim41Q5NCC3 AC122335.1-201ENSMUST00000217587 175 ntBASIC4.75□□□□□ -1.65
Trim41Q5NCC3 mt-Tc-201ENSMUST00000082400 66 ntBASIC4.75□□□□□ -1.65
Trim41Q5NCC3 Gm22245-201ENSMUST00000082479 103 ntBASIC4.75□□□□□ -1.65
Trim41Q5NCC3 Gm37664-201ENSMUST00000194607 3813 ntBASIC4.75□□□□□ -1.65
Trim41Q5NCC3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC4.74□□□□□ -1.65
Trim41Q5NCC3 Mir682-201ENSMUST00000102281 96 ntBASIC4.74□□□□□ -1.65
Trim41Q5NCC3 Gm24000-201ENSMUST00000158063 89 ntBASIC4.74□□□□□ -1.65
Trim41Q5NCC3 Gm24536-201ENSMUST00000083144 107 ntBASIC4.74□□□□□ -1.65
Trim41Q5NCC3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC4.74□□□□□ -1.65
Trim41Q5NCC3 Gm1980-201ENSMUST00000123131 2306 ntBASIC4.73□□□□□ -1.65
Trim41Q5NCC3 Gm11356-201ENSMUST00000118974 192 ntBASIC4.73□□□□□ -1.65
Trim41Q5NCC3 n-R5s189-201ENSMUST00000122675 114 ntBASIC4.73□□□□□ -1.65
Trim41Q5NCC3 Gm23190-201ENSMUST00000180307 64 ntBASIC4.73□□□□□ -1.65
Trim41Q5NCC3 Gm23738-201ENSMUST00000082828 171 ntBASIC4.73□□□□□ -1.65
Trim41Q5NCC3 Mir200b-201ENSMUST00000083615 70 ntBASIC4.73□□□□□ -1.65
Trim41Q5NCC3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim41Q5NCC3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim41Q5NCC3 Snora20-201ENSMUST00000082703 128 ntBASIC4.72□□□□□ -1.65
Trim41Q5NCC3 Gm43473-201ENSMUST00000200442 5997 ntBASIC4.72□□□□□ -1.65
Trim41Q5NCC3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim41Q5NCC3 Mir542-201ENSMUST00000102186 85 ntBASIC4.71□□□□□ -1.66
Trim41Q5NCC3 Gm23803-201ENSMUST00000104610 132 ntBASIC4.71□□□□□ -1.66
Trim41Q5NCC3 Gm22677-201ENSMUST00000116977 108 ntBASIC4.71□□□□□ -1.66
Trim41Q5NCC3 Gm11248-201ENSMUST00000119568 201 ntBASIC4.71□□□□□ -1.66
Trim41Q5NCC3 Gm26073-201ENSMUST00000179906 127 ntBASIC4.71□□□□□ -1.66
Trim41Q5NCC3 Gm27698-201ENSMUST00000184060 249 ntBASIC4.71□□□□□ -1.66
Trim41Q5NCC3 Gm42795-201ENSMUST00000198847 76 ntBASIC4.71□□□□□ -1.66
Trim41Q5NCC3 AC159093.2-201ENSMUST00000227881 297 ntBASIC4.71□□□□□ -1.66
Trim41Q5NCC3 Gm22082-201ENSMUST00000157587 161 ntBASIC4.7□□□□□ -1.66
Trim41Q5NCC3 Gm28155-201ENSMUST00000191066 151 ntBASIC4.7□□□□□ -1.66
Trim41Q5NCC3 Gm42807-201ENSMUST00000200141 329 ntBASIC4.7□□□□□ -1.66
Trim41Q5NCC3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC4.7□□□□□ -1.66
Trim41Q5NCC3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim41Q5NCC3 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim41Q5NCC3 Gm44325-201ENSMUST00000196757 77 ntBASIC4.69□□□□□ -1.66
Trim41Q5NCC3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim41Q5NCC3 Gm37566-201ENSMUST00000192363 4355 ntBASIC4.68□□□□□ -1.66
Trim41Q5NCC3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim41Q5NCC3 Gm23390-201ENSMUST00000157393 106 ntBASIC4.68□□□□□ -1.66
Trim41Q5NCC3 Gm26369-201ENSMUST00000157825 100 ntBASIC4.68□□□□□ -1.66
Trim41Q5NCC3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC4.68□□□□□ -1.66
Trim41Q5NCC3 Gm25854-201ENSMUST00000082792 72 ntBASIC4.68□□□□□ -1.66
Trim41Q5NCC3 Gm25696-201ENSMUST00000082900 105 ntBASIC4.68□□□□□ -1.66
Trim41Q5NCC3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 168.3 ms