Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm25993-201ENSMUST00000175391 80 ntBASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Gm26245-201ENSMUST00000178491 107 ntBASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Mir6369-201ENSMUST00000183772 106 ntBASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC-2.15□□□□□ -2.75
Ccdc88bQ4QRL3 Gm22543-201ENSMUST00000104347 94 ntBASIC-2.16□□□□□ -2.76
Ccdc88bQ4QRL3 Gm25156-201ENSMUST00000179809 79 ntBASIC-2.16□□□□□ -2.76
Ccdc88bQ4QRL3 Gm23404-201ENSMUST00000082543 97 ntBASIC-2.16□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24623-201ENSMUST00000082616 194 ntBASIC-2.16□□□□□ -2.76
Ccdc88bQ4QRL3 Gm23538-201ENSMUST00000157535 101 ntBASIC-2.17□□□□□ -2.76
Ccdc88bQ4QRL3 Gm25712-201ENSMUST00000158634 93 ntBASIC-2.17□□□□□ -2.76
Ccdc88bQ4QRL3 Gm25361-201ENSMUST00000179358 76 ntBASIC-2.17□□□□□ -2.76
Ccdc88bQ4QRL3 Gm18291-201ENSMUST00000190791 301 ntBASIC-2.17□□□□□ -2.76
Ccdc88bQ4QRL3 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC-2.17□□□□□ -2.76
Ccdc88bQ4QRL3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-2.17□□□□□ -2.76
Ccdc88bQ4QRL3 Gm25366-201ENSMUST00000158845 124 ntBASIC-2.18□□□□□ -2.76
Ccdc88bQ4QRL3 CT025526.1-201ENSMUST00000217327 267 ntBASIC-2.18□□□□□ -2.76
Ccdc88bQ4QRL3 Gm25296-201ENSMUST00000082566 67 ntBASIC-2.18□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24522-201ENSMUST00000083964 108 ntBASIC-2.18□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24580-201ENSMUST00000103965 131 ntBASIC-2.19□□□□□ -2.76
Ccdc88bQ4QRL3 Gm6952-201ENSMUST00000118629 159 ntBASIC-2.19□□□□□ -2.76
Ccdc88bQ4QRL3 Gm25334-201ENSMUST00000158036 110 ntBASIC-2.19□□□□□ -2.76
Ccdc88bQ4QRL3 Gm22693-201ENSMUST00000175049 442 ntBASIC-2.19□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24761-201ENSMUST00000179589 127 ntBASIC-2.19□□□□□ -2.76
Ccdc88bQ4QRL3 Gm45232-201ENSMUST00000207811 162 ntBASIC-2.19□□□□□ -2.76
Ccdc88bQ4QRL3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm11936-201ENSMUST00000118323 160 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm22612-201ENSMUST00000158293 101 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm44135-201ENSMUST00000205221 368 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm23628-201ENSMUST00000082464 173 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm23506-201ENSMUST00000083077 107 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24045-201ENSMUST00000083113 98 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24610-201ENSMUST00000083270 109 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Mir872-201ENSMUST00000104728 81 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24592-201ENSMUST00000122505 106 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24073-201ENSMUST00000158177 106 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm44554-201ENSMUST00000208738 147 ntBASIC-2.2□□□□□ -2.76
Ccdc88bQ4QRL3 Gm14126-201ENSMUST00000122345 395 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 Gm23901-201ENSMUST00000157570 107 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 Gm22328-201ENSMUST00000158074 112 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 Gm25194-201ENSMUST00000177987 79 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 Gm42773-201ENSMUST00000196962 148 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 Platr25-208ENSMUST00000222602 939 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 AC159621.1-201ENSMUST00000223249 163 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 Gm25337-201ENSMUST00000083723 104 ntBASIC-2.21□□□□□ -2.76
Ccdc88bQ4QRL3 Gm24836-201ENSMUST00000122609 108 ntBASIC-2.22□□□□□ -2.77
Ccdc88bQ4QRL3 Gm25974-201ENSMUST00000158701 94 ntBASIC-2.22□□□□□ -2.77
Ccdc88bQ4QRL3 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-2.22□□□□□ -2.77
Ccdc88bQ4QRL3 Gm26202-201ENSMUST00000082910 65 ntBASIC-2.22□□□□□ -2.77
Ccdc88bQ4QRL3 Gm24612-201ENSMUST00000083267 107 ntBASIC-2.22□□□□□ -2.77
Ccdc88bQ4QRL3 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
Ccdc88bQ4QRL3 Gm25055-201ENSMUST00000157369 76 ntBASIC-2.23□□□□□ -2.77
Ccdc88bQ4QRL3 Mir136-201ENSMUST00000199494 62 ntBASIC-2.23□□□□□ -2.77
Ccdc88bQ4QRL3 AC129085.1-201ENSMUST00000225263 165 ntBASIC-2.23□□□□□ -2.77
Ccdc88bQ4QRL3 Gm26135-201ENSMUST00000101993 72 ntBASIC-2.24□□□□□ -2.77
Ccdc88bQ4QRL3 Gm22143-201ENSMUST00000157401 203 ntBASIC-2.24□□□□□ -2.77
Ccdc88bQ4QRL3 Snord50b-201ENSMUST00000178497 72 ntBASIC-2.24□□□□□ -2.77
Ccdc88bQ4QRL3 Gm24862-201ENSMUST00000179103 79 ntBASIC-2.24□□□□□ -2.77
Ccdc88bQ4QRL3 Gm23310-201ENSMUST00000179105 79 ntBASIC-2.24□□□□□ -2.77
Ccdc88bQ4QRL3 Gm25461-201ENSMUST00000179293 79 ntBASIC-2.24□□□□□ -2.77
Ccdc88bQ4QRL3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-2.24□□□□□ -2.77
Ccdc88bQ4QRL3 Gm26457-201ENSMUST00000082678 78 ntBASIC-2.24□□□□□ -2.77
Ccdc88bQ4QRL3 Gm25109-201ENSMUST00000122474 114 ntBASIC-2.25□□□□□ -2.77
Ccdc88bQ4QRL3 Gm24595-201ENSMUST00000122501 110 ntBASIC-2.25□□□□□ -2.77
Ccdc88bQ4QRL3 Gm16550-201ENSMUST00000162550 126 ntBASIC-2.25□□□□□ -2.77
Ccdc88bQ4QRL3 Gm24818-201ENSMUST00000175093 161 ntBASIC-2.25□□□□□ -2.77
Ccdc88bQ4QRL3 Gm22308-201ENSMUST00000177609 107 ntBASIC-2.25□□□□□ -2.77
Ccdc88bQ4QRL3 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-2.25□□□□□ -2.77
Ccdc88bQ4QRL3 Snord16a-201ENSMUST00000083895 99 ntBASIC-2.25□□□□□ -2.77
Ccdc88bQ4QRL3 Gm15899-201ENSMUST00000128586 238 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm22999-201ENSMUST00000157082 88 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm24417-201ENSMUST00000178123 79 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm24653-201ENSMUST00000178541 79 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm25934-201ENSMUST00000178642 79 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm26365-201ENSMUST00000179177 94 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Mir30f-201ENSMUST00000196073 92 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm23422-201ENSMUST00000102000 107 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Mir702-201ENSMUST00000102285 109 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm26076-201ENSMUST00000104065 105 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Mir883a-201ENSMUST00000104824 76 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm23654-201ENSMUST00000116758 126 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm22788-201ENSMUST00000157876 61 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm26200-201ENSMUST00000180273 79 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm27676-201ENSMUST00000183669 61 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Mir6957-201ENSMUST00000183708 64 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm23731-201ENSMUST00000083749 107 ntBASIC-2.26□□□□□ -2.77
Ccdc88bQ4QRL3 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.27□□□□□ -2.77
Ccdc88bQ4QRL3 Gm27297-201ENSMUST00000183395 105 ntBASIC-2.27□□□□□ -2.77
Ccdc88bQ4QRL3 Gm10193-201ENSMUST00000188288 231 ntBASIC-2.27□□□□□ -2.77
Ccdc88bQ4QRL3 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC-2.27□□□□□ -2.77
Ccdc88bQ4QRL3 Gm44589-201ENSMUST00000207025 115 ntBASIC-2.27□□□□□ -2.77
Ccdc88bQ4QRL3 Gm23665-201ENSMUST00000158054 62 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 76,532 protein–RNA pairs in 234.3 ms