Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm26026-201ENSMUST00000122726 123 ntBASIC0.65□□□□□ -2.31
Upf3aQ3ULJ3 Gm26090-201ENSMUST00000157897 128 ntBASIC0.65□□□□□ -2.31
Upf3aQ3ULJ3 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.65□□□□□ -2.31
Upf3aQ3ULJ3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Mir695-201ENSMUST00000102261 109 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Gm24559-201ENSMUST00000157519 121 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Gm22767-201ENSMUST00000158365 165 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Gm25935-201ENSMUST00000178746 107 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Gm44948-201ENSMUST00000209050 149 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Gm22686-201ENSMUST00000082847 100 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Mir146-201ENSMUST00000083667 65 ntBASIC0.64□□□□□ -2.31
Upf3aQ3ULJ3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Gm24635-201ENSMUST00000122712 128 ntBASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Gm22387-201ENSMUST00000158191 131 ntBASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Gm44464-201ENSMUST00000198010 138 ntBASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Gm23378-201ENSMUST00000082942 107 ntBASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Mir324-201ENSMUST00000083600 89 ntBASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.63□□□□□ -2.31
Upf3aQ3ULJ3 Gm23841-201ENSMUST00000116951 114 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm12815-201ENSMUST00000121737 135 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm25323-201ENSMUST00000122555 103 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm25828-201ENSMUST00000157087 95 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm28020-201ENSMUST00000157739 67 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm16546-201ENSMUST00000159442 355 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm16404-201ENSMUST00000177739 468 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm14598-201ENSMUST00000180109 468 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm14625-201ENSMUST00000180231 468 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 Mir384-201ENSMUST00000083565 88 ntBASIC0.62□□□□□ -2.31
Upf3aQ3ULJ3 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Mir541-201ENSMUST00000102097 90 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Gm26236-201ENSMUST00000175536 137 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Gm6003-201ENSMUST00000187903 463 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Gm22287-201ENSMUST00000083197 107 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Gm24929-201ENSMUST00000083403 139 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Gm24762-201ENSMUST00000083689 104 ntBASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Upf3aQ3ULJ3 Gm12771-201ENSMUST00000120246 135 ntBASIC0.6□□□□□ -2.31
Upf3aQ3ULJ3 Gm25161-201ENSMUST00000158913 132 ntBASIC0.6□□□□□ -2.31
Upf3aQ3ULJ3 Gm37889-201ENSMUST00000194174 251 ntBASIC0.6□□□□□ -2.31
Upf3aQ3ULJ3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.6□□□□□ -2.31
Upf3aQ3ULJ3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.6□□□□□ -2.31
Upf3aQ3ULJ3 Gm6897-201ENSMUST00000117714 138 ntBASIC0.59□□□□□ -2.31
Upf3aQ3ULJ3 Gm14758-201ENSMUST00000119104 138 ntBASIC0.59□□□□□ -2.31
Upf3aQ3ULJ3 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.59□□□□□ -2.31
Upf3aQ3ULJ3 Gm22482-201ENSMUST00000122563 359 ntBASIC0.59□□□□□ -2.31
Upf3aQ3ULJ3 Gm25015-201ENSMUST00000158400 128 ntBASIC0.59□□□□□ -2.31
Upf3aQ3ULJ3 Gm23047-201ENSMUST00000177661 94 ntBASIC0.59□□□□□ -2.31
Upf3aQ3ULJ3 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC0.59□□□□□ -2.31
Upf3aQ3ULJ3 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Upf3aQ3ULJ3 Gm13922-201ENSMUST00000119505 156 ntBASIC0.58□□□□□ -2.32
Upf3aQ3ULJ3 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.58□□□□□ -2.32
Upf3aQ3ULJ3 Gm12686-201ENSMUST00000120546 397 ntBASIC0.58□□□□□ -2.32
Upf3aQ3ULJ3 Gm25968-201ENSMUST00000157167 100 ntBASIC0.58□□□□□ -2.32
Upf3aQ3ULJ3 Mir15a-201ENSMUST00000175266 84 ntBASIC0.58□□□□□ -2.32
Upf3aQ3ULJ3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.58□□□□□ -2.32
Upf3aQ3ULJ3 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.58□□□□□ -2.32
Upf3aQ3ULJ3 Gm11936-201ENSMUST00000118323 160 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Gm22145-201ENSMUST00000157396 148 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Gm23375-201ENSMUST00000175407 83 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Mir3079-201ENSMUST00000175428 90 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Snora15-201ENSMUST00000177461 131 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Gm25633-201ENSMUST00000178565 107 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Gm44989-201ENSMUST00000204749 217 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Gm25895-201ENSMUST00000083714 100 ntBASIC0.57□□□□□ -2.32
Upf3aQ3ULJ3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Mir547-201ENSMUST00000102051 78 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Mir709-201ENSMUST00000102190 88 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Snord19-201ENSMUST00000104609 76 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Gm23892-201ENSMUST00000158105 130 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Gm16307-201ENSMUST00000161269 210 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Gm25464-201ENSMUST00000175481 107 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Gm44909-201ENSMUST00000208756 165 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Gm25141-201ENSMUST00000083177 107 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.56□□□□□ -2.32
Upf3aQ3ULJ3 Gm24121-201ENSMUST00000102029 106 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Gm24555-201ENSMUST00000104548 124 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Gm23763-201ENSMUST00000158345 60 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Gm25267-201ENSMUST00000158522 63 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Gm25771-201ENSMUST00000158565 144 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Gm22801-201ENSMUST00000175624 84 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Gm27476-201ENSMUST00000183366 104 ntBASIC0.55□□□□□ -2.32
Upf3aQ3ULJ3 Gm27672-201ENSMUST00000183751 204 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms