Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm24747-201ENSMUST00000157835 87 ntBASIC2.1□□□□□ -2.07
Ddb1Q3U1J4 Gm25558-201ENSMUST00000158083 106 ntBASIC2.1□□□□□ -2.07
Ddb1Q3U1J4 Gm25958-201ENSMUST00000175114 71 ntBASIC2.1□□□□□ -2.07
Ddb1Q3U1J4 Gm24572-201ENSMUST00000175505 88 ntBASIC2.1□□□□□ -2.07
Ddb1Q3U1J4 Gm43602-201ENSMUST00000196772 300 ntBASIC2.1□□□□□ -2.07
Ddb1Q3U1J4 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.1□□□□□ -2.07
Ddb1Q3U1J4 Mir3096-201ENSMUST00000116685 71 ntBASIC2.09□□□□□ -2.07
Ddb1Q3U1J4 Gm23336-201ENSMUST00000117023 123 ntBASIC2.09□□□□□ -2.07
Ddb1Q3U1J4 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.09□□□□□ -2.07
Ddb1Q3U1J4 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.09□□□□□ -2.07
Ddb1Q3U1J4 Mir3969-201ENSMUST00000197106 92 ntBASIC2.09□□□□□ -2.07
Ddb1Q3U1J4 Gm22003-201ENSMUST00000101885 107 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Gm14567-201ENSMUST00000117155 174 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Gm22129-201ENSMUST00000179034 107 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Gm23410-201ENSMUST00000179967 107 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Gm22756-201ENSMUST00000180118 107 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Gm22505-201ENSMUST00000082956 108 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Gm22363-201ENSMUST00000083100 108 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Gm23814-201ENSMUST00000083230 102 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Gm23095-201ENSMUST00000083446 107 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Mir490-201ENSMUST00000093567 84 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
Ddb1Q3U1J4 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Gm22545-201ENSMUST00000104350 132 ntBASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Gm24559-201ENSMUST00000157519 121 ntBASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Gm24656-201ENSMUST00000177548 132 ntBASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Gm27792-201ENSMUST00000184031 115 ntBASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Gm25797-201ENSMUST00000082640 107 ntBASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Snord61-201ENSMUST00000083176 71 ntBASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Ddb1Q3U1J4 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm24232-201ENSMUST00000104314 132 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm44489-201ENSMUST00000104619 97 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm24482-201ENSMUST00000117005 93 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm23172-201ENSMUST00000157160 124 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm24916-201ENSMUST00000157287 79 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm23208-201ENSMUST00000158666 127 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Mir3057-201ENSMUST00000175040 91 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Mir7052-201ENSMUST00000184821 65 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Mir7059-201ENSMUST00000184825 59 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm38298-201ENSMUST00000193578 118 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Mir7657-201ENSMUST00000196051 57 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm44464-201ENSMUST00000198010 138 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm25588-201ENSMUST00000082501 140 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Mir201-201ENSMUST00000083470 66 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.06□□□□□ -2.08
Ddb1Q3U1J4 Gm24984-201ENSMUST00000104454 133 ntBASIC2.05□□□□□ -2.08
Ddb1Q3U1J4 Mir6995-201ENSMUST00000183658 71 ntBASIC2.05□□□□□ -2.08
Ddb1Q3U1J4 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.05□□□□□ -2.08
Ddb1Q3U1J4 Gm23138-201ENSMUST00000083365 103 ntBASIC2.05□□□□□ -2.08
Ddb1Q3U1J4 Gm22743-201ENSMUST00000083445 133 ntBASIC2.05□□□□□ -2.08
Ddb1Q3U1J4 Mir221-201ENSMUST00000083488 95 ntBASIC2.05□□□□□ -2.08
Ddb1Q3U1J4 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ddb1Q3U1J4 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Gm25878-201ENSMUST00000104327 93 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Gm26301-201ENSMUST00000104813 95 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Gm14671-201ENSMUST00000121790 262 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Gm24770-201ENSMUST00000158505 92 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Gm23181-201ENSMUST00000158685 110 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Gm24154-201ENSMUST00000175261 130 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Mir3098-201ENSMUST00000175416 87 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Gm23567-201ENSMUST00000178005 107 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Gm44358-201ENSMUST00000196301 98 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Mir448-201ENSMUST00000083516 112 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.04□□□□□ -2.08
Ddb1Q3U1J4 Mir343-201ENSMUST00000102360 75 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Gm26091-201ENSMUST00000122704 82 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Gm24366-201ENSMUST00000175383 86 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Gm25730-201ENSMUST00000178753 165 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Gm43898-201ENSMUST00000204456 424 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Gm44976-201ENSMUST00000205543 261 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Gm26054-201ENSMUST00000083037 107 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Gm24492-201ENSMUST00000083798 107 ntBASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.03□□□□□ -2.08
Ddb1Q3U1J4 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Gm14626-201ENSMUST00000117619 216 ntBASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Gm14502-201ENSMUST00000118154 113 ntBASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Gm23122-201ENSMUST00000157645 103 ntBASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Gm26415-201ENSMUST00000157673 292 ntBASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Gm27934-201ENSMUST00000158795 63 ntBASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Gm8508-201ENSMUST00000061226 363 ntBASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Gm25987-201ENSMUST00000083234 107 ntBASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Gm25409-201ENSMUST00000083764 131 ntBASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ddb1Q3U1J4 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ddb1Q3U1J4 Gm24624-201ENSMUST00000082617 164 ntBASIC2.01□□□□□ -2.09
Ddb1Q3U1J4 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ddb1Q3U1J4 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Ddb1Q3U1J4 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2□□□□□ -2.09
Ddb1Q3U1J4 n-R5s73-201ENSMUST00000122508 107 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 196.7 ms