Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm44325-201ENSMUST00000196757 77 ntBASIC2.06□□□□□ -2.08
Usp39Q3TIX9 Gm45429-201ENSMUST00000209527 172 ntBASIC2.06□□□□□ -2.08
Usp39Q3TIX9 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.06□□□□□ -2.08
Usp39Q3TIX9 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.05□□□□□ -2.08
Usp39Q3TIX9 Gm26051-201ENSMUST00000104642 93 ntBASIC2.05□□□□□ -2.08
Usp39Q3TIX9 Mir293-201ENSMUST00000104841 80 ntBASIC2.05□□□□□ -2.08
Usp39Q3TIX9 Gm25884-201ENSMUST00000157782 62 ntBASIC2.05□□□□□ -2.08
Usp39Q3TIX9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Usp39Q3TIX9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.05□□□□□ -2.08
Usp39Q3TIX9 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.05□□□□□ -2.08
Usp39Q3TIX9 Gm25357-201ENSMUST00000082745 72 ntBASIC2.05□□□□□ -2.08
Usp39Q3TIX9 Gm25402-201ENSMUST00000082966 131 ntBASIC2.05□□□□□ -2.08
Usp39Q3TIX9 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm22772-201ENSMUST00000104451 121 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm14937-201ENSMUST00000119709 208 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm14671-201ENSMUST00000121790 262 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm24913-201ENSMUST00000157286 107 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm23670-201ENSMUST00000157469 119 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm25371-201ENSMUST00000158162 101 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm27878-201ENSMUST00000184000 106 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm9156-201ENSMUST00000189660 463 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm44308-201ENSMUST00000197080 99 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Gm45386-201ENSMUST00000210194 218 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Mir34a-201ENSMUST00000083559 102 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Mir29c-201ENSMUST00000083614 88 ntBASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Usp39Q3TIX9 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Snord78-201ENSMUST00000104032 66 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Gm22033-201ENSMUST00000116947 90 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Gm22338-201ENSMUST00000157715 129 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Gm29535-201ENSMUST00000185723 109 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Gm28143-201ENSMUST00000191082 109 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Gm43512-201ENSMUST00000198495 176 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Gm42807-201ENSMUST00000200141 329 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Mir497-201ENSMUST00000200557 84 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Mir93-201ENSMUST00000083593 88 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Mir301-201ENSMUST00000083655 86 ntBASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Usp39Q3TIX9 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm14674-201ENSMUST00000117816 342 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm26253-201ENSMUST00000122493 103 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm23469-201ENSMUST00000157131 104 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm24250-201ENSMUST00000157320 135 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm26345-201ENSMUST00000157534 120 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm22332-201ENSMUST00000158072 126 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm23770-201ENSMUST00000178009 108 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm22832-201ENSMUST00000178022 108 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm23863-201ENSMUST00000178265 108 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm24828-201ENSMUST00000178507 108 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm23052-201ENSMUST00000178633 108 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm25729-201ENSMUST00000179050 108 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm25359-201ENSMUST00000179315 108 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Gm22624-201ENSMUST00000179913 108 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 Mir7215-201ENSMUST00000200383 51 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.02□□□□□ -2.09
Usp39Q3TIX9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm25460-201ENSMUST00000157954 127 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm22387-201ENSMUST00000158191 131 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm22159-201ENSMUST00000158412 130 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm22943-201ENSMUST00000158564 76 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm25978-201ENSMUST00000158698 90 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm24345-201ENSMUST00000158706 124 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm24177-201ENSMUST00000158927 131 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm22638-201ENSMUST00000179674 107 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm27446-201ENSMUST00000183963 89 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm43206-201ENSMUST00000197990 114 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm44408-201ENSMUST00000200205 66 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm22283-201ENSMUST00000082556 161 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm25851-201ENSMUST00000082794 107 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm24038-201ENSMUST00000082872 159 ntBASIC2.01□□□□□ -2.09
Usp39Q3TIX9 Gm42635-201ENSMUST00000200266 2571 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm23950-201ENSMUST00000104026 129 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm23048-201ENSMUST00000157237 129 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm24237-201ENSMUST00000157790 132 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm22535-201ENSMUST00000158174 119 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm23854-201ENSMUST00000158378 108 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2□□□□□ -2.09
Usp39Q3TIX9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm42960-201ENSMUST00000202160 241 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm45544-201ENSMUST00000211130 88 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Snora41-201ENSMUST00000082668 132 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm25697-201ENSMUST00000082902 98 ntBASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Usp39Q3TIX9 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Usp39Q3TIX9 Gm22679-201ENSMUST00000116975 100 ntBASIC1.99□□□□□ -2.09
Usp39Q3TIX9 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.99□□□□□ -2.09
Usp39Q3TIX9 Mir3083-201ENSMUST00000175377 64 ntBASIC1.99□□□□□ -2.09
Usp39Q3TIX9 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.99□□□□□ -2.09
Usp39Q3TIX9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Usp39Q3TIX9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 1270.3 ms