Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm25482-201ENSMUST00000083225 107 ntBASIC0.9□□□□□ -2.27
Ptchd3Q0EEE2 Mir451a-201ENSMUST00000093557 72 ntBASIC0.9□□□□□ -2.27
Ptchd3Q0EEE2 Gm22544-201ENSMUST00000104349 127 ntBASIC0.89□□□□□ -2.27
Ptchd3Q0EEE2 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.89□□□□□ -2.27
Ptchd3Q0EEE2 Gm22515-201ENSMUST00000158273 305 ntBASIC0.89□□□□□ -2.27
Ptchd3Q0EEE2 Gm28256-201ENSMUST00000188953 139 ntBASIC0.89□□□□□ -2.27
Ptchd3Q0EEE2 Gm28559-201ENSMUST00000190532 139 ntBASIC0.89□□□□□ -2.27
Ptchd3Q0EEE2 Gm13922-201ENSMUST00000119505 156 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Gm23328-201ENSMUST00000157418 132 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Gm24942-201ENSMUST00000158328 114 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Gm23760-201ENSMUST00000158350 116 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Mir1954-201ENSMUST00000175595 86 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Gm27974-201ENSMUST00000183415 105 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Gm45471-201ENSMUST00000211270 281 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Gm24624-201ENSMUST00000082617 164 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Mir186-201ENSMUST00000083497 71 ntBASIC0.88□□□□□ -2.27
Ptchd3Q0EEE2 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm26090-201ENSMUST00000157897 128 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm23852-201ENSMUST00000158376 77 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm16539-201ENSMUST00000160086 327 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm16404-201ENSMUST00000177739 468 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm14598-201ENSMUST00000180109 468 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm14625-201ENSMUST00000180231 468 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Mir7052-201ENSMUST00000184821 65 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm44976-201ENSMUST00000205543 261 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm45002-201ENSMUST00000208045 120 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.87□□□□□ -2.27
Ptchd3Q0EEE2 Gm26160-201ENSMUST00000158965 63 ntBASIC0.86□□□□□ -2.27
Ptchd3Q0EEE2 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.86□□□□□ -2.27
Ptchd3Q0EEE2 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm23130-201ENSMUST00000104252 74 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm26301-201ENSMUST00000104813 95 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm24640-201ENSMUST00000116949 126 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm22626-201ENSMUST00000116990 126 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm12771-201ENSMUST00000120246 135 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm22259-201ENSMUST00000178926 107 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm24761-201ENSMUST00000179589 127 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm24488-201ENSMUST00000179934 127 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm25701-201ENSMUST00000179988 127 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm26431-201ENSMUST00000180199 127 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm27694-201ENSMUST00000184740 86 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm18213-201ENSMUST00000207850 178 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm24311-201ENSMUST00000082570 104 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm22809-201ENSMUST00000082743 156 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Mir196b-201ENSMUST00000083509 85 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Mir324-201ENSMUST00000083600 89 ntBASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Ptchd3Q0EEE2 Gm24401-201ENSMUST00000157868 91 ntBASIC0.84□□□□□ -2.27
Ptchd3Q0EEE2 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Ptchd3Q0EEE2 Gm27672-201ENSMUST00000183751 204 ntBASIC0.84□□□□□ -2.27
Ptchd3Q0EEE2 Mir468-201ENSMUST00000197332 78 ntBASIC0.84□□□□□ -2.27
Ptchd3Q0EEE2 Gm19790-201ENSMUST00000214414 251 ntBASIC0.84□□□□□ -2.27
Ptchd3Q0EEE2 Gm22689-201ENSMUST00000102452 110 ntBASIC0.83□□□□□ -2.28
Ptchd3Q0EEE2 Gm24132-201ENSMUST00000104745 91 ntBASIC0.83□□□□□ -2.28
Ptchd3Q0EEE2 Gm12432-201ENSMUST00000119540 186 ntBASIC0.83□□□□□ -2.28
Ptchd3Q0EEE2 Mir1961-201ENSMUST00000158643 112 ntBASIC0.83□□□□□ -2.28
Ptchd3Q0EEE2 Gm38323-201ENSMUST00000192450 210 ntBASIC0.83□□□□□ -2.28
Ptchd3Q0EEE2 Gm42533-201ENSMUST00000196247 157 ntBASIC0.83□□□□□ -2.28
Ptchd3Q0EEE2 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.83□□□□□ -2.28
Ptchd3Q0EEE2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Ptchd3Q0EEE2 Gm22790-201ENSMUST00000157229 129 ntBASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 Gm25166-201ENSMUST00000158909 111 ntBASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 Gm27587-201ENSMUST00000185116 163 ntBASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 Gm38364-201ENSMUST00000191814 179 ntBASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 Gm18188-201ENSMUST00000219386 478 ntBASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 Snord82-201ENSMUST00000082889 70 ntBASIC0.82□□□□□ -2.28
Ptchd3Q0EEE2 Snord70-201ENSMUST00000104157 87 ntBASIC0.81□□□□□ -2.28
Ptchd3Q0EEE2 Gm25771-201ENSMUST00000158565 144 ntBASIC0.81□□□□□ -2.28
Ptchd3Q0EEE2 Gm25044-201ENSMUST00000158603 104 ntBASIC0.81□□□□□ -2.28
Ptchd3Q0EEE2 Gm44948-201ENSMUST00000209050 149 ntBASIC0.81□□□□□ -2.28
Ptchd3Q0EEE2 Gm26326-201ENSMUST00000083070 129 ntBASIC0.81□□□□□ -2.28
Ptchd3Q0EEE2 Mir33-201ENSMUST00000083531 69 ntBASIC0.81□□□□□ -2.28
Ptchd3Q0EEE2 Mir27b-201ENSMUST00000083541 73 ntBASIC0.81□□□□□ -2.28
Ptchd3Q0EEE2 Gm26076-201ENSMUST00000104065 105 ntBASIC0.8□□□□□ -2.28
Ptchd3Q0EEE2 Snord100-201ENSMUST00000116836 74 ntBASIC0.8□□□□□ -2.28
Ptchd3Q0EEE2 Gm25715-201ENSMUST00000158627 125 ntBASIC0.8□□□□□ -2.28
Ptchd3Q0EEE2 Mir7663-201ENSMUST00000183950 61 ntBASIC0.8□□□□□ -2.28
Ptchd3Q0EEE2 Gm26204-201ENSMUST00000082906 107 ntBASIC0.8□□□□□ -2.28
Ptchd3Q0EEE2 Gm22673-201ENSMUST00000104415 131 ntBASIC0.79□□□□□ -2.28
Ptchd3Q0EEE2 Gm13345-201ENSMUST00000121928 228 ntBASIC0.79□□□□□ -2.28
Ptchd3Q0EEE2 Gm24379-201ENSMUST00000122695 86 ntBASIC0.79□□□□□ -2.28
Ptchd3Q0EEE2 Gm23375-201ENSMUST00000175407 83 ntBASIC0.79□□□□□ -2.28
Ptchd3Q0EEE2 Snord32a-201ENSMUST00000083285 83 ntBASIC0.79□□□□□ -2.28
Ptchd3Q0EEE2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Gm23766-201ENSMUST00000103894 80 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Gm22195-201ENSMUST00000116861 108 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Gm14567-201ENSMUST00000117155 174 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Gm6952-201ENSMUST00000118629 159 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Gm25882-201ENSMUST00000157784 85 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Gm20386-201ENSMUST00000174010 132 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Gm24415-201ENSMUST00000180218 107 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Mir7039-201ENSMUST00000183852 85 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.78□□□□□ -2.28
Ptchd3Q0EEE2 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 218.2 ms