Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm26398-201ENSMUST00000179015 127 ntBASIC3.19□□□□□ -1.9
Col9a1Q05722 Gm26297-201ENSMUST00000179464 132 ntBASIC3.19□□□□□ -1.9
Col9a1Q05722 Gm23249-201ENSMUST00000083369 161 ntBASIC3.19□□□□□ -1.9
Col9a1Q05722 Gm23347-201ENSMUST00000083823 82 ntBASIC3.19□□□□□ -1.9
Col9a1Q05722 Gm24162-201ENSMUST00000093665 102 ntBASIC3.19□□□□□ -1.9
Col9a1Q05722 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col9a1Q05722 Gm44560-201ENSMUST00000207816 3115 ntBASIC3.19□□□□□ -1.9
Col9a1Q05722 Gm18795-202ENSMUST00000223373 2920 ntBASIC3.19□□□□□ -1.9
Col9a1Q05722 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Col9a1Q05722 Mir764-201ENSMUST00000103259 108 ntBASIC3.18□□□□□ -1.9
Col9a1Q05722 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC3.18□□□□□ -1.9
Col9a1Q05722 Gm6788-201ENSMUST00000166459 270 ntBASIC3.18□□□□□ -1.9
Col9a1Q05722 Mir7682-201ENSMUST00000198467 58 ntBASIC3.18□□□□□ -1.9
Col9a1Q05722 Mir7215-201ENSMUST00000200383 51 ntBASIC3.18□□□□□ -1.9
Col9a1Q05722 AC164612.2-202ENSMUST00000216314 253 ntBASIC3.18□□□□□ -1.9
Col9a1Q05722 Gm25798-201ENSMUST00000082641 107 ntBASIC3.18□□□□□ -1.9
Col9a1Q05722 Mir5117-201ENSMUST00000083226 84 ntBASIC3.18□□□□□ -1.9
Col9a1Q05722 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Col9a1Q05722 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col9a1Q05722 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Col9a1Q05722 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col9a1Q05722 Gm24183-201ENSMUST00000122572 93 ntBASIC3.17□□□□□ -1.9
Col9a1Q05722 Gm24199-201ENSMUST00000157808 136 ntBASIC3.17□□□□□ -1.9
Col9a1Q05722 Gm24075-201ENSMUST00000158175 72 ntBASIC3.17□□□□□ -1.9
Col9a1Q05722 Gm22425-201ENSMUST00000158532 138 ntBASIC3.17□□□□□ -1.9
Col9a1Q05722 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.17□□□□□ -1.9
Col9a1Q05722 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC3.17□□□□□ -1.9
Col9a1Q05722 Gm24412-201ENSMUST00000083426 109 ntBASIC3.17□□□□□ -1.9
Col9a1Q05722 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Col9a1Q05722 Gm15654-201ENSMUST00000152660 300 ntBASIC3.16□□□□□ -1.9
Col9a1Q05722 Gm22722-201ENSMUST00000157467 132 ntBASIC3.16□□□□□ -1.9
Col9a1Q05722 Gm23592-201ENSMUST00000157859 117 ntBASIC3.16□□□□□ -1.9
Col9a1Q05722 Gm22833-201ENSMUST00000158292 132 ntBASIC3.16□□□□□ -1.9
Col9a1Q05722 Gm44462-201ENSMUST00000199696 129 ntBASIC3.16□□□□□ -1.9
Col9a1Q05722 Mir429-201ENSMUST00000083493 83 ntBASIC3.16□□□□□ -1.9
Col9a1Q05722 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.16□□□□□ -1.9
Col9a1Q05722 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Col9a1Q05722 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Col9a1Q05722 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.15□□□□□ -1.9
Col9a1Q05722 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.15□□□□□ -1.9
Col9a1Q05722 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Col9a1Q05722 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col9a1Q05722 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm26387-201ENSMUST00000104238 132 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm14884-201ENSMUST00000120456 196 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm25322-201ENSMUST00000122556 104 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm23996-201ENSMUST00000158062 131 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm22732-201ENSMUST00000158093 121 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm23714-201ENSMUST00000179259 105 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm27898-201ENSMUST00000183987 80 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm43722-201ENSMUST00000196054 124 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Gm23570-201ENSMUST00000083029 104 ntBASIC3.15□□□□□ -1.91
Col9a1Q05722 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col9a1Q05722 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col9a1Q05722 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col9a1Q05722 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Col9a1Q05722 Gm14405-201ENSMUST00000117808 2330 ntBASIC3.14□□□□□ -1.91
Col9a1Q05722 Gm24670-201ENSMUST00000104154 132 ntBASIC3.14□□□□□ -1.91
Col9a1Q05722 Gm23785-201ENSMUST00000116741 96 ntBASIC3.14□□□□□ -1.91
Col9a1Q05722 Gm25011-201ENSMUST00000158398 126 ntBASIC3.14□□□□□ -1.91
Col9a1Q05722 Mir3471-1-201ENSMUST00000175139 131 ntBASIC3.14□□□□□ -1.91
Col9a1Q05722 Gm23375-201ENSMUST00000175407 83 ntBASIC3.14□□□□□ -1.91
Col9a1Q05722 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col9a1Q05722 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Mir20b-201ENSMUST00000102087 80 ntBASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm23980-201ENSMUST00000157135 158 ntBASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm23231-201ENSMUST00000157299 104 ntBASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm24851-201ENSMUST00000158028 103 ntBASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 Gm44408-201ENSMUST00000200205 66 ntBASIC3.13□□□□□ -1.91
Col9a1Q05722 Mir127-201ENSMUST00000093568 70 ntBASIC3.13□□□□□ -1.91
Col9a1Q05722 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col9a1Q05722 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.13□□□□□ -1.91
Col9a1Q05722 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col9a1Q05722 Gm24384-201ENSMUST00000122693 75 ntBASIC3.12□□□□□ -1.91
Col9a1Q05722 Gm24177-201ENSMUST00000158927 131 ntBASIC3.12□□□□□ -1.91
Col9a1Q05722 Mir7026-201ENSMUST00000184384 67 ntBASIC3.12□□□□□ -1.91
Col9a1Q05722 Gm38356-201ENSMUST00000194313 408 ntBASIC3.12□□□□□ -1.91
Col9a1Q05722 Gm34314-201ENSMUST00000203622 367 ntBASIC3.12□□□□□ -1.91
Col9a1Q05722 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.12□□□□□ -1.91
Col9a1Q05722 Gm44133-202ENSMUST00000204450 2586 ntBASIC3.12□□□□□ -1.91
Col9a1Q05722 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col9a1Q05722 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col9a1Q05722 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 Gm11966-201ENSMUST00000119907 87 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 Gm24868-201ENSMUST00000157265 136 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 Gm26485-201ENSMUST00000158019 64 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 Gm24077-201ENSMUST00000158183 136 ntBASIC3.11□□□□□ -1.91
Col9a1Q05722 Snord92-201ENSMUST00000175548 85 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms