Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm37807-201ENSMUST00000194310 190 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Mir6925-201ENSMUST00000197857 70 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Gm43512-201ENSMUST00000198495 176 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Gm43977-201ENSMUST00000203970 189 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.12□□□□□ -2.07
Col8a1Q00780 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Col8a1Q00780 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm6444-201ENSMUST00000119611 458 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm12309-201ENSMUST00000119889 182 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm23983-201ENSMUST00000157142 114 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm23601-201ENSMUST00000157259 131 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm25711-201ENSMUST00000158633 128 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm22283-201ENSMUST00000082556 161 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm24261-201ENSMUST00000083744 104 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.11□□□□□ -2.07
Col8a1Q00780 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col8a1Q00780 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col8a1Q00780 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col8a1Q00780 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Col8a1Q00780 Gm25526-201ENSMUST00000104332 132 ntBASIC2.1□□□□□ -2.07
Col8a1Q00780 Gm24238-201ENSMUST00000157792 98 ntBASIC2.1□□□□□ -2.07
Col8a1Q00780 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.1□□□□□ -2.07
Col8a1Q00780 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.1□□□□□ -2.07
Col8a1Q00780 Gm24038-201ENSMUST00000082872 159 ntBASIC2.1□□□□□ -2.07
Col8a1Q00780 Mir222-201ENSMUST00000083537 79 ntBASIC2.1□□□□□ -2.07
Col8a1Q00780 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.1□□□□□ -2.07
Col8a1Q00780 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm25680-201ENSMUST00000116917 126 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm22635-201ENSMUST00000116962 126 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm12941-201ENSMUST00000117934 220 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm22731-201ENSMUST00000158086 94 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Traj61-201ENSMUST00000165025 72 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm23369-201ENSMUST00000175406 105 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm23190-201ENSMUST00000180307 64 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm27991-201ENSMUST00000184804 137 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm44903-201ENSMUST00000206840 130 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm45268-201ENSMUST00000210046 370 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Gm45522-201ENSMUST00000210784 166 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Mir411-201ENSMUST00000083543 82 ntBASIC2.09□□□□□ -2.07
Col8a1Q00780 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col8a1Q00780 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col8a1Q00780 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col8a1Q00780 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col8a1Q00780 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Col8a1Q00780 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Gm26339-201ENSMUST00000102368 99 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Gm14882-201ENSMUST00000117216 218 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Gm23986-201ENSMUST00000157144 63 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Gm24345-201ENSMUST00000158706 124 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Gm44325-201ENSMUST00000196757 77 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Gm42807-201ENSMUST00000200141 329 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Gm44555-201ENSMUST00000209008 148 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Snord104-201ENSMUST00000083192 70 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Mir29c-201ENSMUST00000083614 88 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.08□□□□□ -2.08
Col8a1Q00780 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Col8a1Q00780 Gm26077-201ENSMUST00000104064 123 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 Gm22706-201ENSMUST00000157907 112 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 Gm23033-201ENSMUST00000157996 134 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 Gm23261-201ENSMUST00000158316 136 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 Gm45386-201ENSMUST00000210194 218 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 Gm25697-201ENSMUST00000082902 98 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 Gm24203-201ENSMUST00000082949 114 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 Gm26109-201ENSMUST00000083970 70 ntBASIC2.07□□□□□ -2.08
Col8a1Q00780 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.07□□□□□ -2.08
Col8a1Q00780 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col8a1Q00780 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col8a1Q00780 Gm26425-201ENSMUST00000122529 82 ntBASIC2.06□□□□□ -2.08
Col8a1Q00780 Gm26105-201ENSMUST00000157253 190 ntBASIC2.06□□□□□ -2.08
Col8a1Q00780 Gm25976-201ENSMUST00000158695 130 ntBASIC2.06□□□□□ -2.08
Col8a1Q00780 Gm27365-201ENSMUST00000184041 177 ntBASIC2.06□□□□□ -2.08
Col8a1Q00780 Mir7225-201ENSMUST00000184178 54 ntBASIC2.06□□□□□ -2.08
Col8a1Q00780 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.06□□□□□ -2.08
Col8a1Q00780 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.06□□□□□ -2.08
Col8a1Q00780 Mir301-201ENSMUST00000083655 86 ntBASIC2.06□□□□□ -2.08
Col8a1Q00780 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.06□□□□□ -2.08
Col8a1Q00780 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col8a1Q00780 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm23390-201ENSMUST00000157393 106 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm24000-201ENSMUST00000158063 89 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm23714-201ENSMUST00000179259 105 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm26073-201ENSMUST00000179906 127 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm27898-201ENSMUST00000183987 80 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm42960-201ENSMUST00000202160 241 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm7214-201ENSMUST00000222428 272 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm23249-201ENSMUST00000083369 161 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.05□□□□□ -2.08
Col8a1Q00780 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms