Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm25157-201ENSMUST00000178914 94 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Gm22046-201ENSMUST00000179027 94 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Gm22941-201ENSMUST00000179630 94 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Gm26092-201ENSMUST00000179798 97 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Gm25471-201ENSMUST00000180126 94 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Gm6003-201ENSMUST00000187903 463 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Gm19790-201ENSMUST00000214414 251 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.07□□□□□ -2.24
CiitaP79621 Gm24276-201ENSMUST00000102181 110 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Gm26293-201ENSMUST00000104170 84 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Gm23130-201ENSMUST00000104252 74 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Gm25184-201ENSMUST00000157753 163 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Gm24729-201ENSMUST00000158225 137 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Gm27974-201ENSMUST00000183415 105 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Mir6380-201ENSMUST00000184334 81 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Mir6394-201ENSMUST00000184738 99 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Snora20-201ENSMUST00000082703 128 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Gm24522-201ENSMUST00000083964 108 ntBASIC1.06□□□□□ -2.24
CiitaP79621 Gm24385-201ENSMUST00000122694 350 ntBASIC1.05□□□□□ -2.24
CiitaP79621 Gm24015-201ENSMUST00000157725 232 ntBASIC1.05□□□□□ -2.24
CiitaP79621 Gm26090-201ENSMUST00000157897 128 ntBASIC1.05□□□□□ -2.24
CiitaP79621 Gm25654-201ENSMUST00000158467 88 ntBASIC1.05□□□□□ -2.24
CiitaP79621 Gm24311-201ENSMUST00000082570 104 ntBASIC1.05□□□□□ -2.24
CiitaP79621 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.04□□□□□ -2.24
CiitaP79621 Gm6952-201ENSMUST00000118629 159 ntBASIC1.04□□□□□ -2.24
CiitaP79621 Gm24559-201ENSMUST00000157519 121 ntBASIC1.04□□□□□ -2.24
CiitaP79621 Gm23893-201ENSMUST00000158106 134 ntBASIC1.04□□□□□ -2.24
CiitaP79621 Gm26160-201ENSMUST00000158965 63 ntBASIC1.04□□□□□ -2.24
CiitaP79621 Gm16539-201ENSMUST00000160086 327 ntBASIC1.04□□□□□ -2.24
CiitaP79621 Gm45268-201ENSMUST00000210046 370 ntBASIC1.04□□□□□ -2.24
CiitaP79621 Snord82-201ENSMUST00000082889 70 ntBASIC1.04□□□□□ -2.24
CiitaP79621 Snord100-201ENSMUST00000116836 74 ntBASIC1.03□□□□□ -2.24
CiitaP79621 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CiitaP79621 Gm22565-201ENSMUST00000175540 69 ntBASIC1.03□□□□□ -2.24
CiitaP79621 Gm38274-201ENSMUST00000195689 148 ntBASIC1.03□□□□□ -2.24
CiitaP79621 Mir468-201ENSMUST00000197332 78 ntBASIC1.03□□□□□ -2.24
CiitaP79621 Gm44976-201ENSMUST00000205543 261 ntBASIC1.03□□□□□ -2.24
CiitaP79621 Mir451a-201ENSMUST00000093557 72 ntBASIC1.03□□□□□ -2.24
CiitaP79621 Gm24431-201ENSMUST00000104073 66 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Gm24590-201ENSMUST00000116699 119 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Gm22999-201ENSMUST00000157082 88 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CiitaP79621 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Gm18213-201ENSMUST00000207850 178 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Gm22809-201ENSMUST00000082743 156 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Mir200b-201ENSMUST00000083615 70 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Snord35a-201ENSMUST00000083884 90 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Gm25683-201ENSMUST00000083940 131 ntBASIC1.02□□□□□ -2.25
CiitaP79621 Gm14567-201ENSMUST00000117155 174 ntBASIC1.01□□□□□ -2.25
CiitaP79621 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Gm25828-201ENSMUST00000157087 95 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Mir1961-201ENSMUST00000158643 112 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Gm25364-201ENSMUST00000158851 107 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Gm25241-201ENSMUST00000174909 84 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Gm26217-201ENSMUST00000175212 84 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CiitaP79621 Mir6985-201ENSMUST00000184641 61 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Gm44464-201ENSMUST00000198010 138 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Gm42506-201ENSMUST00000202009 150 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Mir27b-201ENSMUST00000083541 73 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.01□□□□□ -2.25
CiitaP79621 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CiitaP79621 Gm24342-201ENSMUST00000103907 104 ntBASIC1□□□□□ -2.25
CiitaP79621 Mir1898-201ENSMUST00000122643 83 ntBASIC1□□□□□ -2.25
CiitaP79621 Gm23258-201ENSMUST00000158319 106 ntBASIC1□□□□□ -2.25
CiitaP79621 Gm22425-201ENSMUST00000158532 138 ntBASIC1□□□□□ -2.25
CiitaP79621 Gm25834-201ENSMUST00000158916 101 ntBASIC1□□□□□ -2.25
CiitaP79621 Gm42533-201ENSMUST00000196247 157 ntBASIC1□□□□□ -2.25
CiitaP79621 AC154390.1-201ENSMUST00000225629 277 ntBASIC1□□□□□ -2.25
CiitaP79621 Mir186-201ENSMUST00000083497 71 ntBASIC1□□□□□ -2.25
CiitaP79621 Mir344-201ENSMUST00000083634 95 ntBASIC1□□□□□ -2.25
CiitaP79621 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
CiitaP79621 Mir466p-201ENSMUST00000103925 89 ntBASIC0.99□□□□□ -2.25
CiitaP79621 Gm25464-201ENSMUST00000175481 107 ntBASIC0.99□□□□□ -2.25
CiitaP79621 Gm44948-201ENSMUST00000209050 149 ntBASIC0.99□□□□□ -2.25
CiitaP79621 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.99□□□□□ -2.25
CiitaP79621 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.99□□□□□ -2.25
CiitaP79621 Mir709-201ENSMUST00000102190 88 ntBASIC0.98□□□□□ -2.25
CiitaP79621 Gm44458-201ENSMUST00000196594 143 ntBASIC0.98□□□□□ -2.25
CiitaP79621 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.98□□□□□ -2.25
CiitaP79621 Gm24762-201ENSMUST00000083689 104 ntBASIC0.98□□□□□ -2.25
CiitaP79621 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.97□□□□□ -2.25
CiitaP79621 Gm25044-201ENSMUST00000158603 104 ntBASIC0.97□□□□□ -2.25
CiitaP79621 Gm23375-201ENSMUST00000175407 83 ntBASIC0.97□□□□□ -2.25
CiitaP79621 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.97□□□□□ -2.25
CiitaP79621 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.97□□□□□ -2.25
CiitaP79621 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CiitaP79621 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CiitaP79621 Gm22544-201ENSMUST00000104349 127 ntBASIC0.95□□□□□ -2.26
CiitaP79621 Gm14838-201ENSMUST00000118913 248 ntBASIC0.95□□□□□ -2.26
CiitaP79621 Gm13345-201ENSMUST00000121928 228 ntBASIC0.95□□□□□ -2.26
CiitaP79621 Gm26274-201ENSMUST00000157103 321 ntBASIC0.95□□□□□ -2.26
CiitaP79621 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CiitaP79621 Gm27587-201ENSMUST00000185116 163 ntBASIC0.95□□□□□ -2.26
CiitaP79621 Gm44301-201ENSMUST00000200362 143 ntBASIC0.95□□□□□ -2.26
CiitaP79621 Gm44353-201ENSMUST00000200618 138 ntBASIC0.95□□□□□ -2.26
CiitaP79621 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms