Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Mir3109-201ENSMUST00000175301 88 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm26236-201ENSMUST00000175536 137 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Mir7052-201ENSMUST00000184821 65 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm8219-201ENSMUST00000218309 242 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm24527-201ENSMUST00000082920 107 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Mir196b-201ENSMUST00000083509 85 ntBASIC0.46□□□□□ -2.34
Ufd1P70362 Gm12432-201ENSMUST00000119540 186 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Gm26484-201ENSMUST00000158018 106 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Gm22522-201ENSMUST00000158271 151 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Gm25771-201ENSMUST00000158565 144 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.45□□□□□ -2.34
Ufd1P70362 Gm25397-201ENSMUST00000176951 92 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Gm19790-201ENSMUST00000214414 251 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Gm26123-201ENSMUST00000083363 135 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Mir30a-201ENSMUST00000083471 71 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.45□□□□□ -2.34
Ufd1P70362 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Ufd1P70362 Gm6272-201ENSMUST00000121256 171 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Gm25464-201ENSMUST00000175481 107 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Gm23714-201ENSMUST00000179259 105 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Mir7663-201ENSMUST00000183950 61 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Gm44211-201ENSMUST00000204867 145 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Gm26326-201ENSMUST00000083070 129 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Gm24762-201ENSMUST00000083689 104 ntBASIC0.44□□□□□ -2.34
Ufd1P70362 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Snord69-201ENSMUST00000104024 80 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Gm25506-201ENSMUST00000104339 70 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Gm23841-201ENSMUST00000116951 114 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Gm6985-201ENSMUST00000121255 271 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Gm13345-201ENSMUST00000121928 228 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Gm24509-201ENSMUST00000157086 101 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Gm25358-201ENSMUST00000157189 101 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Gm23416-201ENSMUST00000175520 95 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Gm44462-201ENSMUST00000199696 129 ntBASIC0.43□□□□□ -2.34
Ufd1P70362 Mir541-201ENSMUST00000102097 90 ntBASIC0.42□□□□□ -2.34
Ufd1P70362 Gm24867-201ENSMUST00000104161 107 ntBASIC0.42□□□□□ -2.34
Ufd1P70362 Snord100-201ENSMUST00000116836 74 ntBASIC0.42□□□□□ -2.34
Ufd1P70362 Gm16265-201ENSMUST00000134558 108 ntBASIC0.42□□□□□ -2.34
Ufd1P70362 Gm22101-201ENSMUST00000157928 103 ntBASIC0.42□□□□□ -2.34
Ufd1P70362 Mir6389-201ENSMUST00000183661 102 ntBASIC0.42□□□□□ -2.34
Ufd1P70362 Gm38364-201ENSMUST00000191814 179 ntBASIC0.42□□□□□ -2.34
Ufd1P70362 Gm25895-201ENSMUST00000083714 100 ntBASIC0.42□□□□□ -2.34
Ufd1P70362 Snord71-201ENSMUST00000104361 85 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm14567-201ENSMUST00000117155 174 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm6897-201ENSMUST00000117714 138 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm14758-201ENSMUST00000119104 138 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm22999-201ENSMUST00000157082 88 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm25015-201ENSMUST00000158400 128 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm26160-201ENSMUST00000158965 63 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.41□□□□□ -2.34
Ufd1P70362 Mir3968-201ENSMUST00000175355 100 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Ufd1P70362 Mir532-201ENSMUST00000093630 96 ntBASIC0.41□□□□□ -2.34
Ufd1P70362 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.4□□□□□ -2.34
Ufd1P70362 Gm25611-201ENSMUST00000104017 133 ntBASIC0.4□□□□□ -2.35
Ufd1P70362 Gm14001-201ENSMUST00000118847 247 ntBASIC0.4□□□□□ -2.35
Ufd1P70362 Gm22482-201ENSMUST00000122563 359 ntBASIC0.4□□□□□ -2.35
Ufd1P70362 Gm25223-201ENSMUST00000158200 110 ntBASIC0.4□□□□□ -2.35
Ufd1P70362 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.4□□□□□ -2.35
Ufd1P70362 Gm44989-201ENSMUST00000204749 217 ntBASIC0.4□□□□□ -2.35
Ufd1P70362 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.4□□□□□ -2.35
Ufd1P70362 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.4□□□□□ -2.35
Ufd1P70362 Gm24121-201ENSMUST00000102029 106 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Ufd1P70362 Snord19-201ENSMUST00000104609 76 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm15289-201ENSMUST00000117793 244 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm14884-201ENSMUST00000120456 196 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm12686-201ENSMUST00000120546 397 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm24500-201ENSMUST00000158447 124 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm24549-201ENSMUST00000158647 139 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm22466-201ENSMUST00000175278 69 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm23047-201ENSMUST00000177661 94 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm24415-201ENSMUST00000180218 107 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm27656-201ENSMUST00000185055 80 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Gm25814-201ENSMUST00000082754 107 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Mir410-201ENSMUST00000083563 81 ntBASIC0.39□□□□□ -2.35
Ufd1P70362 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Ufd1P70362 Gm6952-201ENSMUST00000118629 159 ntBASIC0.38□□□□□ -2.35
Ufd1P70362 Gm22145-201ENSMUST00000157396 148 ntBASIC0.38□□□□□ -2.35
Ufd1P70362 Gm25494-201ENSMUST00000158143 100 ntBASIC0.38□□□□□ -2.35
Ufd1P70362 Gm24728-201ENSMUST00000158226 125 ntBASIC0.38□□□□□ -2.35
Ufd1P70362 Gm23003-201ENSMUST00000179948 107 ntBASIC0.38□□□□□ -2.35
Ufd1P70362 Gm43432-201ENSMUST00000196352 121 ntBASIC0.38□□□□□ -2.35
Ufd1P70362 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.38□□□□□ -2.35
Ufd1P70362 Gm24476-201ENSMUST00000157437 131 ntBASIC0.37□□□□□ -2.35
Ufd1P70362 Gm24963-201ENSMUST00000157916 144 ntBASIC0.37□□□□□ -2.35
Ufd1P70362 Gm23838-201ENSMUST00000158067 162 ntBASIC0.37□□□□□ -2.35
Ufd1P70362 Gm23892-201ENSMUST00000158105 130 ntBASIC0.37□□□□□ -2.35
Ufd1P70362 Gm27476-201ENSMUST00000183366 104 ntBASIC0.37□□□□□ -2.35
Ufd1P70362 Gm27894-201ENSMUST00000184177 92 ntBASIC0.37□□□□□ -2.35
Ufd1P70362 Gm43944-201ENSMUST00000205220 120 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms