Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
Cux1P53564 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.86□□□□□ -2.55
Cux1P53564 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.87□□□□□ -2.55
Cux1P53564 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.87□□□□□ -2.55
Cux1P53564 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.87□□□□□ -2.55
Cux1P53564 Gm44726-201ENSMUST00000203427 217 ntBASIC-0.87□□□□□ -2.55
Cux1P53564 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.87□□□□□ -2.55
Cux1P53564 AC192333.2-201ENSMUST00000224771 196 ntBASIC-0.87□□□□□ -2.55
Cux1P53564 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.88□□□□□ -2.55
Cux1P53564 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.88□□□□□ -2.55
Cux1P53564 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.88□□□□□ -2.55
Cux1P53564 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.88□□□□□ -2.55
Cux1P53564 Zfp950-206ENSMUST00000178819 171 ntBASIC-0.88□□□□□ -2.55
Cux1P53564 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.88□□□□□ -2.55
Cux1P53564 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
Cux1P53564 Gm23448-201ENSMUST00000083151 104 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.89□□□□□ -2.55
Cux1P53564 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.9□□□□□ -2.55
Cux1P53564 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.9□□□□□ -2.55
Cux1P53564 Mir582-201ENSMUST00000103758 81 ntBASIC-0.9□□□□□ -2.55
Cux1P53564 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.9□□□□□ -2.55
Cux1P53564 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.9□□□□□ -2.55
Cux1P53564 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.9□□□□□ -2.55
Cux1P53564 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.9□□□□□ -2.55
Cux1P53564 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-0.91□□□□□ -2.56
Cux1P53564 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 Gm23148-201ENSMUST00000180367 107 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 AC167192.2-201ENSMUST00000224794 198 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 Gm25258-201ENSMUST00000083049 107 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.91□□□□□ -2.56
Cux1P53564 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.92□□□□□ -2.56
Cux1P53564 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.92□□□□□ -2.56
Cux1P53564 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.92□□□□□ -2.56
Cux1P53564 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.92□□□□□ -2.56
Cux1P53564 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.92□□□□□ -2.56
Cux1P53564 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.93□□□□□ -2.56
Cux1P53564 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.93□□□□□ -2.56
Cux1P53564 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.93□□□□□ -2.56
Cux1P53564 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.93□□□□□ -2.56
Cux1P53564 Gm44395-201ENSMUST00000197056 153 ntBASIC-0.93□□□□□ -2.56
Cux1P53564 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.93□□□□□ -2.56
Cux1P53564 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm44487-201ENSMUST00000205145 325 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm28330-201ENSMUST00000190353 171 ntBASIC-0.94□□□□□ -2.56
Cux1P53564 Gm25507-201ENSMUST00000116981 144 ntBASIC-0.95□□□□□ -2.56
Cux1P53564 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.95□□□□□ -2.56
Cux1P53564 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-0.95□□□□□ -2.56
Cux1P53564 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.95□□□□□ -2.56
Cux1P53564 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.95□□□□□ -2.56
Cux1P53564 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
Cux1P53564 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.96□□□□□ -2.56
Cux1P53564 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.96□□□□□ -2.56
Cux1P53564 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.96□□□□□ -2.56
Cux1P53564 Gm23016-201ENSMUST00000158431 62 ntBASIC-0.96□□□□□ -2.56
Cux1P53564 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.96□□□□□ -2.56
Cux1P53564 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
Cux1P53564 Gm23625-201ENSMUST00000082457 100 ntBASIC-0.96□□□□□ -2.56
Cux1P53564 Gm25586-201ENSMUST00000082499 112 ntBASIC-0.96□□□□□ -2.56
Cux1P53564 Snord60-201ENSMUST00000082834 78 ntBASIC-0.96□□□□□ -2.56
Cux1P53564 Gm14766-201ENSMUST00000121689 367 ntBASIC-0.97□□□□□ -2.56
Cux1P53564 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.98□□□□□ -2.57
Cux1P53564 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.98□□□□□ -2.57
Cux1P53564 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.98□□□□□ -2.57
Cux1P53564 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.98□□□□□ -2.57
Cux1P53564 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.98□□□□□ -2.57
Cux1P53564 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.98□□□□□ -2.57
Cux1P53564 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
Cux1P53564 Snora62-201ENSMUST00000082991 149 ntBASIC-0.98□□□□□ -2.57
Cux1P53564 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.99□□□□□ -2.57
Cux1P53564 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms