Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
Cdx2P43241 Mir721-201ENSMUST00000200230 88 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm24150-201ENSMUST00000082759 104 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm26056-201ENSMUST00000083043 104 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.35□□□□□ -2.47
Cdx2P43241 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
Cdx2P43241 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.36□□□□□ -2.47
Cdx2P43241 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.36□□□□□ -2.47
Cdx2P43241 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.36□□□□□ -2.47
Cdx2P43241 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.36□□□□□ -2.47
Cdx2P43241 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.36□□□□□ -2.47
Cdx2P43241 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.36□□□□□ -2.47
Cdx2P43241 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.36□□□□□ -2.47
Cdx2P43241 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.36□□□□□ -2.47
Cdx2P43241 Snora19-201ENSMUST00000082962 132 ntBASIC-0.36□□□□□ -2.47
Cdx2P43241 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.36□□□□□ -2.47
Cdx2P43241 Gm26076-201ENSMUST00000104065 105 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 Gm16356-201ENSMUST00000143300 169 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-0.37□□□□□ -2.47
Cdx2P43241 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.37□□□□□ -2.47
Cdx2P43241 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Cdx2P43241 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.38□□□□□ -2.47
Cdx2P43241 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.38□□□□□ -2.47
Cdx2P43241 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.38□□□□□ -2.47
Cdx2P43241 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.38□□□□□ -2.47
Cdx2P43241 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.38□□□□□ -2.47
Cdx2P43241 Gm43238-201ENSMUST00000196463 359 ntBASIC-0.38□□□□□ -2.47
Cdx2P43241 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.38□□□□□ -2.47
Cdx2P43241 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.38□□□□□ -2.47
Cdx2P43241 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Gm25611-201ENSMUST00000104017 133 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC-0.39□□□□□ -2.47
Cdx2P43241 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC-0.39□□□□□ -2.47
Cdx2P43241 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC-0.39□□□□□ -2.47
Cdx2P43241 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-0.39□□□□□ -2.47
Cdx2P43241 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.39□□□□□ -2.47
Cdx2P43241 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Cdx2P43241 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.4□□□□□ -2.47
Cdx2P43241 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.4□□□□□ -2.47
Cdx2P43241 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.4□□□□□ -2.47
Cdx2P43241 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.4□□□□□ -2.47
Cdx2P43241 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.4□□□□□ -2.47
Cdx2P43241 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.4□□□□□ -2.47
Cdx2P43241 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.4□□□□□ -2.47
Cdx2P43241 Mir327-201ENSMUST00000199328 69 ntBASIC-0.4□□□□□ -2.47
Cdx2P43241 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.41□□□□□ -2.47
Cdx2P43241 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 AC131720.2-201ENSMUST00000220420 431 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.41□□□□□ -2.48
Cdx2P43241 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.42□□□□□ -2.48
Cdx2P43241 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.42□□□□□ -2.48
Cdx2P43241 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.42□□□□□ -2.48
Cdx2P43241 Mir759-201ENSMUST00000103254 98 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.43□□□□□ -2.48
Cdx2P43241 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 303.5 ms