Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm25044-201ENSMUST00000158603 104 ntBASIC0.55□□□□□ -2.32
Sox6P40645 Gm24678-201ENSMUST00000158756 104 ntBASIC0.55□□□□□ -2.32
Sox6P40645 Gm24323-201ENSMUST00000175342 77 ntBASIC0.55□□□□□ -2.32
Sox6P40645 Gm25464-201ENSMUST00000175481 107 ntBASIC0.55□□□□□ -2.32
Sox6P40645 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.55□□□□□ -2.32
Sox6P40645 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.55□□□□□ -2.32
Sox6P40645 Gm26326-201ENSMUST00000083070 129 ntBASIC0.55□□□□□ -2.32
Sox6P40645 Mir384-201ENSMUST00000083565 88 ntBASIC0.55□□□□□ -2.32
Sox6P40645 Mir10b-201ENSMUST00000083566 68 ntBASIC0.55□□□□□ -2.32
Sox6P40645 Snord33-201ENSMUST00000083694 84 ntBASIC0.55□□□□□ -2.32
Sox6P40645 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Sox6P40645 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
Sox6P40645 Gm15069-201ENSMUST00000117792 192 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Gm15068-201ENSMUST00000119796 192 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Gm16265-201ENSMUST00000134558 108 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Gm24225-201ENSMUST00000158825 98 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Gm25362-201ENSMUST00000158854 105 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Gm23047-201ENSMUST00000177661 94 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Sox6P40645 Gm36956-201ENSMUST00000193830 214 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Gm22358-201ENSMUST00000082877 122 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Gm24929-201ENSMUST00000083403 139 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Gm25188-201ENSMUST00000083913 122 ntBASIC0.54□□□□□ -2.32
Sox6P40645 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.54□□□□□ -2.32
Sox6P40645 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.53□□□□□ -2.32
Sox6P40645 Mir541-201ENSMUST00000102097 90 ntBASIC0.53□□□□□ -2.32
Sox6P40645 Gm11248-201ENSMUST00000119568 201 ntBASIC0.53□□□□□ -2.32
Sox6P40645 Gm22145-201ENSMUST00000157396 148 ntBASIC0.53□□□□□ -2.32
Sox6P40645 Gm27476-201ENSMUST00000183366 104 ntBASIC0.53□□□□□ -2.32
Sox6P40645 Mir6377-201ENSMUST00000183760 114 ntBASIC0.53□□□□□ -2.32
Sox6P40645 Gm28435-201ENSMUST00000185496 108 ntBASIC0.53□□□□□ -2.32
Sox6P40645 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.53□□□□□ -2.32
Sox6P40645 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.53□□□□□ -2.32
Sox6P40645 Mir344-201ENSMUST00000083634 95 ntBASIC0.53□□□□□ -2.32
Sox6P40645 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Sox6P40645 Snord19-201ENSMUST00000104609 76 ntBASIC0.52□□□□□ -2.33
Sox6P40645 Gm12686-201ENSMUST00000120546 397 ntBASIC0.52□□□□□ -2.33
Sox6P40645 Gm25323-201ENSMUST00000122555 103 ntBASIC0.52□□□□□ -2.33
Sox6P40645 Gm22796-201ENSMUST00000157234 106 ntBASIC0.52□□□□□ -2.33
Sox6P40645 Gm26236-201ENSMUST00000175536 137 ntBASIC0.52□□□□□ -2.33
Sox6P40645 Snora15-201ENSMUST00000177461 131 ntBASIC0.52□□□□□ -2.33
Sox6P40645 Mir101a-201ENSMUST00000083517 83 ntBASIC0.52□□□□□ -2.33
Sox6P40645 Gm6897-201ENSMUST00000117714 138 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Gm14758-201ENSMUST00000119104 138 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Gm24385-201ENSMUST00000122694 350 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Gm22790-201ENSMUST00000157229 129 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Gm25390-201ENSMUST00000157341 103 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Gm22522-201ENSMUST00000158271 151 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Gm22433-201ENSMUST00000158550 142 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Gm25771-201ENSMUST00000158565 144 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.51□□□□□ -2.33
Sox6P40645 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.51□□□□□ -2.33
Sox6P40645 Rny1-201ENSMUST00000083767 112 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Mir500-201ENSMUST00000093600 92 ntBASIC0.51□□□□□ -2.33
Sox6P40645 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Sox6P40645 Mir669l-201ENSMUST00000103771 98 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Gm25378-201ENSMUST00000104333 129 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Gm22482-201ENSMUST00000122563 359 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Gm16307-201ENSMUST00000161269 210 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Mir3079-201ENSMUST00000175428 90 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Gm44488-201ENSMUST00000199467 119 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Gm22686-201ENSMUST00000082847 100 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Gm24616-201ENSMUST00000083274 139 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Gm25895-201ENSMUST00000083714 100 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Mir532-201ENSMUST00000093630 96 ntBASIC0.5□□□□□ -2.33
Sox6P40645 Gm24121-201ENSMUST00000102029 106 ntBASIC0.49□□□□□ -2.33
Sox6P40645 Gm22051-201ENSMUST00000117002 127 ntBASIC0.49□□□□□ -2.33
Sox6P40645 Gm25654-201ENSMUST00000158467 88 ntBASIC0.49□□□□□ -2.33
Sox6P40645 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.49□□□□□ -2.33
Sox6P40645 Gm23375-201ENSMUST00000175407 83 ntBASIC0.49□□□□□ -2.33
Sox6P40645 Gm25397-201ENSMUST00000176951 92 ntBASIC0.49□□□□□ -2.33
Sox6P40645 Gm27289-201ENSMUST00000183341 82 ntBASIC0.49□□□□□ -2.33
Sox6P40645 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.49□□□□□ -2.33
Sox6P40645 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.49□□□□□ -2.33
Sox6P40645 Gm24342-201ENSMUST00000103907 104 ntBASIC0.48□□□□□ -2.33
Sox6P40645 Mir466p-201ENSMUST00000103925 89 ntBASIC0.48□□□□□ -2.33
Sox6P40645 Gm23008-201ENSMUST00000158946 80 ntBASIC0.48□□□□□ -2.33
Sox6P40645 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.48□□□□□ -2.33
Sox6P40645 Gm22801-201ENSMUST00000175624 84 ntBASIC0.48□□□□□ -2.33
Sox6P40645 Mir669k-201ENSMUST00000177742 127 ntBASIC0.48□□□□□ -2.33
Sox6P40645 Gm25673-201ENSMUST00000179957 127 ntBASIC0.48□□□□□ -2.33
Sox6P40645 Mir7039-201ENSMUST00000183852 85 ntBASIC0.48□□□□□ -2.33
Sox6P40645 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.48□□□□□ -2.33
Sox6P40645 Gm22302-201ENSMUST00000082657 106 ntBASIC0.48□□□□□ -2.33
Sox6P40645 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.47□□□□□ -2.33
Sox6P40645 Gm24171-201ENSMUST00000104126 131 ntBASIC0.47□□□□□ -2.33
Sox6P40645 Gm25184-201ENSMUST00000157753 163 ntBASIC0.47□□□□□ -2.33
Sox6P40645 Gm22387-201ENSMUST00000158191 131 ntBASIC0.47□□□□□ -2.33
Sox6P40645 Gm44989-201ENSMUST00000204749 217 ntBASIC0.47□□□□□ -2.33
Sox6P40645 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.47□□□□□ -2.33
Sox6P40645 Gm25138-201ENSMUST00000083248 136 ntBASIC0.47□□□□□ -2.33
Sox6P40645 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
Sox6P40645 Gm25110-201ENSMUST00000116684 121 ntBASIC0.46□□□□□ -2.34
Sox6P40645 Gm25775-201ENSMUST00000116716 121 ntBASIC0.46□□□□□ -2.34
Sox6P40645 Gm24795-201ENSMUST00000116737 121 ntBASIC0.46□□□□□ -2.34
Sox6P40645 Gm25171-201ENSMUST00000116926 121 ntBASIC0.46□□□□□ -2.34
Sox6P40645 Gm23892-201ENSMUST00000158105 130 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms