Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm22559-201ENSMUST00000157329 134 ntBASIC1.42□□□□□ -2.18
RxraP28700 Gm23106-201ENSMUST00000157554 101 ntBASIC1.42□□□□□ -2.18
RxraP28700 Gm22551-201ENSMUST00000157795 103 ntBASIC1.42□□□□□ -2.18
RxraP28700 Gm25958-201ENSMUST00000175114 71 ntBASIC1.42□□□□□ -2.18
RxraP28700 Gm25949-201ENSMUST00000175333 114 ntBASIC1.42□□□□□ -2.18
RxraP28700 Gm16399-201ENSMUST00000181423 219 ntBASIC1.42□□□□□ -2.18
RxraP28700 Gm27711-201ENSMUST00000183802 118 ntBASIC1.42□□□□□ -2.18
RxraP28700 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RxraP28700 Gm14671-201ENSMUST00000121790 262 ntBASIC1.41□□□□□ -2.18
RxraP28700 Gm22850-201ENSMUST00000157714 82 ntBASIC1.41□□□□□ -2.18
RxraP28700 Gm22387-201ENSMUST00000158191 131 ntBASIC1.41□□□□□ -2.18
RxraP28700 Gm22139-201ENSMUST00000158747 105 ntBASIC1.41□□□□□ -2.18
RxraP28700 Gm38364-201ENSMUST00000191814 179 ntBASIC1.41□□□□□ -2.18
RxraP28700 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RxraP28700 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.41□□□□□ -2.18
RxraP28700 Gm23299-201ENSMUST00000082708 79 ntBASIC1.41□□□□□ -2.18
RxraP28700 Gm25832-201ENSMUST00000104140 130 ntBASIC1.4□□□□□ -2.19
RxraP28700 Gm22149-201ENSMUST00000104442 136 ntBASIC1.4□□□□□ -2.19
RxraP28700 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.4□□□□□ -2.19
RxraP28700 Gm25663-201ENSMUST00000157698 135 ntBASIC1.4□□□□□ -2.19
RxraP28700 Gm22163-201ENSMUST00000158408 135 ntBASIC1.4□□□□□ -2.19
RxraP28700 Gm26360-201ENSMUST00000158872 103 ntBASIC1.4□□□□□ -2.19
RxraP28700 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.4□□□□□ -2.19
RxraP28700 Gm26080-201ENSMUST00000104069 131 ntBASIC1.39□□□□□ -2.19
RxraP28700 Gm26049-201ENSMUST00000157313 108 ntBASIC1.39□□□□□ -2.19
RxraP28700 Gm22967-201ENSMUST00000157956 239 ntBASIC1.39□□□□□ -2.19
RxraP28700 Gm24054-201ENSMUST00000158619 105 ntBASIC1.39□□□□□ -2.19
RxraP28700 Gm23714-201ENSMUST00000179259 105 ntBASIC1.39□□□□□ -2.19
RxraP28700 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.39□□□□□ -2.19
RxraP28700 Gm37116-201ENSMUST00000195161 147 ntBASIC1.39□□□□□ -2.19
RxraP28700 Gm42988-201ENSMUST00000198116 225 ntBASIC1.39□□□□□ -2.19
RxraP28700 Gm44338-201ENSMUST00000198614 110 ntBASIC1.39□□□□□ -2.19
RxraP28700 Snord100-201ENSMUST00000116836 74 ntBASIC1.38□□□□□ -2.19
RxraP28700 Gm11857-201ENSMUST00000119817 324 ntBASIC1.38□□□□□ -2.19
RxraP28700 Gm24559-201ENSMUST00000157519 121 ntBASIC1.38□□□□□ -2.19
RxraP28700 Gm17020-201ENSMUST00000172274 274 ntBASIC1.38□□□□□ -2.19
RxraP28700 Gm27326-201ENSMUST00000183504 95 ntBASIC1.38□□□□□ -2.19
RxraP28700 Gm28862-201ENSMUST00000188246 163 ntBASIC1.38□□□□□ -2.19
RxraP28700 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.38□□□□□ -2.19
RxraP28700 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.38□□□□□ -2.19
RxraP28700 Gm44859-201ENSMUST00000207831 94 ntBASIC1.38□□□□□ -2.19
RxraP28700 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.38□□□□□ -2.19
RxraP28700 Gm25409-201ENSMUST00000083764 131 ntBASIC1.38□□□□□ -2.19
RxraP28700 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
RxraP28700 Gm24263-201ENSMUST00000104059 107 ntBASIC1.37□□□□□ -2.19
RxraP28700 Gm25495-201ENSMUST00000104431 131 ntBASIC1.37□□□□□ -2.19
RxraP28700 Gm23122-201ENSMUST00000157645 103 ntBASIC1.37□□□□□ -2.19
RxraP28700 Gm24902-201ENSMUST00000158126 123 ntBASIC1.37□□□□□ -2.19
RxraP28700 Gm23967-201ENSMUST00000175062 78 ntBASIC1.37□□□□□ -2.19
RxraP28700 Gm25071-201ENSMUST00000175232 70 ntBASIC1.37□□□□□ -2.19
RxraP28700 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.37□□□□□ -2.19
RxraP28700 Gm27493-201ENSMUST00000184128 78 ntBASIC1.37□□□□□ -2.19
RxraP28700 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.37□□□□□ -2.19
RxraP28700 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.37□□□□□ -2.19
RxraP28700 Gm25915-201ENSMUST00000104265 126 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
RxraP28700 Gm25425-201ENSMUST00000157611 96 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm24808-201ENSMUST00000157993 118 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm22612-201ENSMUST00000158293 101 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm25838-201ENSMUST00000158920 120 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm25831-201ENSMUST00000158924 163 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm27672-201ENSMUST00000183751 204 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm18502-201ENSMUST00000218679 199 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm25136-201ENSMUST00000083253 115 ntBASIC1.36□□□□□ -2.19
RxraP28700 Mir451a-201ENSMUST00000093557 72 ntBASIC1.36□□□□□ -2.19
RxraP28700 Gm23772-201ENSMUST00000104433 102 ntBASIC1.35□□□□□ -2.19
RxraP28700 Gm23320-201ENSMUST00000104462 127 ntBASIC1.35□□□□□ -2.19
RxraP28700 Gm22373-201ENSMUST00000104584 89 ntBASIC1.35□□□□□ -2.19
RxraP28700 Gm23907-201ENSMUST00000104595 189 ntBASIC1.35□□□□□ -2.19
RxraP28700 Gm14567-201ENSMUST00000117155 174 ntBASIC1.35□□□□□ -2.19
RxraP28700 Gm23080-201ENSMUST00000157846 103 ntBASIC1.35□□□□□ -2.19
RxraP28700 Gm22200-201ENSMUST00000158614 67 ntBASIC1.35□□□□□ -2.19
RxraP28700 Snora24-201ENSMUST00000174989 130 ntBASIC1.35□□□□□ -2.19
RxraP28700 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.35□□□□□ -2.19
RxraP28700 Gm22738-201ENSMUST00000083440 147 ntBASIC1.35□□□□□ -2.19
RxraP28700 Gm25650-201ENSMUST00000083784 162 ntBASIC1.35□□□□□ -2.19
RxraP28700 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RxraP28700 Gm26074-201ENSMUST00000104063 129 ntBASIC1.34□□□□□ -2.19
RxraP28700 Gm12309-201ENSMUST00000119889 182 ntBASIC1.34□□□□□ -2.19
RxraP28700 Gm23337-201ENSMUST00000158959 118 ntBASIC1.34□□□□□ -2.19
RxraP28700 Gm22802-201ENSMUST00000175621 89 ntBASIC1.34□□□□□ -2.19
RxraP28700 Gm44385-201ENSMUST00000198781 81 ntBASIC1.34□□□□□ -2.19
RxraP28700 Mir6962-201ENSMUST00000199512 63 ntBASIC1.34□□□□□ -2.19
RxraP28700 Snora20-201ENSMUST00000082703 128 ntBASIC1.34□□□□□ -2.19
RxraP28700 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
RxraP28700 Gm14568-201ENSMUST00000119321 294 ntBASIC1.33□□□□□ -2.2
RxraP28700 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.33□□□□□ -2.2
RxraP28700 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.33□□□□□ -2.2
RxraP28700 Gm26090-201ENSMUST00000157897 128 ntBASIC1.33□□□□□ -2.2
RxraP28700 Gm22946-201ENSMUST00000158558 82 ntBASIC1.33□□□□□ -2.2
RxraP28700 Gm28794-201ENSMUST00000185276 136 ntBASIC1.33□□□□□ -2.2
RxraP28700 Gm44358-201ENSMUST00000196301 98 ntBASIC1.33□□□□□ -2.2
RxraP28700 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.33□□□□□ -2.2
RxraP28700 Gm44470-201ENSMUST00000203913 142 ntBASIC1.33□□□□□ -2.2
RxraP28700 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.33□□□□□ -2.2
RxraP28700 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.33□□□□□ -2.2
RxraP28700 Gm23947-201ENSMUST00000093636 107 ntBASIC1.33□□□□□ -2.2
RxraP28700 Gm24232-201ENSMUST00000104314 132 ntBASIC1.32□□□□□ -2.2
RxraP28700 Gm25882-201ENSMUST00000157784 85 ntBASIC1.32□□□□□ -2.2
RxraP28700 Gm27420-201ENSMUST00000183823 79 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 132.8 ms