Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm25267-201ENSMUST00000158522 63 ntBASIC0.66□□□□□ -2.3
Cd40lgP27548 Gm25044-201ENSMUST00000158603 104 ntBASIC0.66□□□□□ -2.3
Cd40lgP27548 Gm25718-201ENSMUST00000158632 118 ntBASIC0.66□□□□□ -2.3
Cd40lgP27548 Mir3109-201ENSMUST00000175301 88 ntBASIC0.66□□□□□ -2.3
Cd40lgP27548 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.66□□□□□ -2.3
Cd40lgP27548 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.66□□□□□ -2.3
Cd40lgP27548 Gm23735-201ENSMUST00000082551 134 ntBASIC0.66□□□□□ -2.3
Cd40lgP27548 Gm24929-201ENSMUST00000083403 139 ntBASIC0.66□□□□□ -2.3
Cd40lgP27548 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Cd40lgP27548 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Gm26338-201ENSMUST00000102372 110 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Gm26293-201ENSMUST00000104170 84 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.65□□□□□ -2.31
Cd40lgP27548 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Gm23047-201ENSMUST00000177661 94 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Gm6003-201ENSMUST00000187903 463 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Gm44490-201ENSMUST00000198566 127 ntBASIC0.65□□□□□ -2.31
Cd40lgP27548 Mir709-201ENSMUST00000102190 88 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Mir695-201ENSMUST00000102261 109 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Gm12686-201ENSMUST00000120546 397 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Gm24747-201ENSMUST00000157835 87 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Mir15a-201ENSMUST00000175266 84 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Gm44989-201ENSMUST00000204749 217 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Cd40lgP27548 Gm25141-201ENSMUST00000083177 107 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.64□□□□□ -2.31
Cd40lgP27548 Gm24121-201ENSMUST00000102029 106 ntBASIC0.63□□□□□ -2.31
Cd40lgP27548 Gm23892-201ENSMUST00000158105 130 ntBASIC0.63□□□□□ -2.31
Cd40lgP27548 Gm25015-201ENSMUST00000158400 128 ntBASIC0.63□□□□□ -2.31
Cd40lgP27548 Gm23008-201ENSMUST00000158946 80 ntBASIC0.63□□□□□ -2.31
Cd40lgP27548 Snora15-201ENSMUST00000177461 131 ntBASIC0.63□□□□□ -2.31
Cd40lgP27548 Gm27672-201ENSMUST00000183751 204 ntBASIC0.63□□□□□ -2.31
Cd40lgP27548 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Cd40lgP27548 Gm37889-201ENSMUST00000194174 251 ntBASIC0.63□□□□□ -2.31
Cd40lgP27548 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
Cd40lgP27548 Snord19-201ENSMUST00000104609 76 ntBASIC0.62□□□□□ -2.31
Cd40lgP27548 Gm22145-201ENSMUST00000157396 148 ntBASIC0.62□□□□□ -2.31
Cd40lgP27548 Gm25223-201ENSMUST00000158200 110 ntBASIC0.62□□□□□ -2.31
Cd40lgP27548 Gm24323-201ENSMUST00000175342 77 ntBASIC0.62□□□□□ -2.31
Cd40lgP27548 Gm23375-201ENSMUST00000175407 83 ntBASIC0.62□□□□□ -2.31
Cd40lgP27548 DQ267101-201ENSMUST00000082562 73 ntBASIC0.62□□□□□ -2.31
Cd40lgP27548 Mir216a-201ENSMUST00000083605 72 ntBASIC0.62□□□□□ -2.31
Cd40lgP27548 Gm25895-201ENSMUST00000083714 100 ntBASIC0.62□□□□□ -2.31
Cd40lgP27548 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.62□□□□□ -2.31
Cd40lgP27548 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Cd40lgP27548 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 Mir3079-201ENSMUST00000175428 90 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 Gm19790-201ENSMUST00000214414 251 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 Gm22744-201ENSMUST00000083444 65 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 Mir362-201ENSMUST00000093592 65 ntBASIC0.61□□□□□ -2.31
Cd40lgP27548 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm26274-201ENSMUST00000157103 321 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm25968-201ENSMUST00000157167 100 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm25241-201ENSMUST00000174909 84 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm26217-201ENSMUST00000175212 84 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm27476-201ENSMUST00000183366 104 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm38364-201ENSMUST00000191814 179 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm24616-201ENSMUST00000083274 139 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm24762-201ENSMUST00000083689 104 ntBASIC0.6□□□□□ -2.31
Cd40lgP27548 Gm22433-201ENSMUST00000158550 142 ntBASIC0.59□□□□□ -2.31
Cd40lgP27548 Gm26160-201ENSMUST00000158965 63 ntBASIC0.59□□□□□ -2.31
Cd40lgP27548 Gm16307-201ENSMUST00000161269 210 ntBASIC0.59□□□□□ -2.31
Cd40lgP27548 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.59□□□□□ -2.31
Cd40lgP27548 Gm25464-201ENSMUST00000175481 107 ntBASIC0.59□□□□□ -2.31
Cd40lgP27548 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.59□□□□□ -2.31
Cd40lgP27548 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Cd40lgP27548 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.59□□□□□ -2.31
Cd40lgP27548 Gm23970-201ENSMUST00000083319 107 ntBASIC0.59□□□□□ -2.31
Cd40lgP27548 Gm25416-201ENSMUST00000104221 107 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Snord100-201ENSMUST00000116836 74 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Gm13577-201ENSMUST00000121365 205 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Gm26279-201ENSMUST00000157095 102 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Gm25494-201ENSMUST00000158143 100 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Gm25749-201ENSMUST00000175485 111 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Gm22801-201ENSMUST00000175624 84 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Gm22951-201ENSMUST00000179471 107 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Mir101a-201ENSMUST00000083517 83 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.58□□□□□ -2.32
Cd40lgP27548 Mir547-201ENSMUST00000102051 78 ntBASIC0.57□□□□□ -2.32
Cd40lgP27548 Gm24579-201ENSMUST00000103964 144 ntBASIC0.57□□□□□ -2.32
Cd40lgP27548 Gm25771-201ENSMUST00000158565 144 ntBASIC0.57□□□□□ -2.32
Cd40lgP27548 Gm24867-201ENSMUST00000104161 107 ntBASIC0.56□□□□□ -2.32
Cd40lgP27548 Gm14567-201ENSMUST00000117155 174 ntBASIC0.56□□□□□ -2.32
Cd40lgP27548 Gm13345-201ENSMUST00000121928 228 ntBASIC0.56□□□□□ -2.32
Cd40lgP27548 Gm24678-201ENSMUST00000158756 104 ntBASIC0.56□□□□□ -2.32
Cd40lgP27548 Gm26076-201ENSMUST00000104065 105 ntBASIC0.55□□□□□ -2.32
Cd40lgP27548 Gm22469-201ENSMUST00000104118 133 ntBASIC0.55□□□□□ -2.32
Cd40lgP27548 Gm23203-201ENSMUST00000104374 107 ntBASIC0.55□□□□□ -2.32
Cd40lgP27548 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Cd40lgP27548 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 156.3 ms