Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm44563-201ENSMUST00000207958 178 ntBASIC0.31□□□□□ -2.36
Lire1P11260 Gm12837-201ENSMUST00000120131 373 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Gm26152-201ENSMUST00000157427 101 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Gm23278-201ENSMUST00000157911 143 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Gm25718-201ENSMUST00000158632 118 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Gm26287-201ENSMUST00000158887 81 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Gm25024-201ENSMUST00000179667 104 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Gm44464-201ENSMUST00000198010 138 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Gm23406-201ENSMUST00000082537 122 ntBASIC0.3□□□□□ -2.36
Lire1P11260 Gm25424-201ENSMUST00000157612 58 ntBASIC0.29□□□□□ -2.36
Lire1P11260 Gm24392-201ENSMUST00000158136 103 ntBASIC0.29□□□□□ -2.36
Lire1P11260 Gm24667-201ENSMUST00000158938 103 ntBASIC0.29□□□□□ -2.36
Lire1P11260 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.29□□□□□ -2.36
Lire1P11260 Gm28008-201ENSMUST00000184021 186 ntBASIC0.29□□□□□ -2.36
Lire1P11260 Gm27521-201ENSMUST00000184022 64 ntBASIC0.29□□□□□ -2.36
Lire1P11260 Gm45313-201ENSMUST00000210584 178 ntBASIC0.29□□□□□ -2.36
Lire1P11260 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.29□□□□□ -2.36
Lire1P11260 Mir547-201ENSMUST00000102051 78 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Snord69-201ENSMUST00000104024 80 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm22784-201ENSMUST00000104088 132 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm15289-201ENSMUST00000117793 244 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm12924-201ENSMUST00000121747 318 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm22491-201ENSMUST00000157190 102 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm22706-201ENSMUST00000157907 112 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm27475-201ENSMUST00000183420 61 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Mir7065-201ENSMUST00000185110 61 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Lire1P11260 Gm43505-201ENSMUST00000200579 139 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm26447-201ENSMUST00000082448 129 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm24765-201ENSMUST00000083691 103 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm10222-201ENSMUST00000088336 294 ntBASIC0.28□□□□□ -2.36
Lire1P11260 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm13922-201ENSMUST00000119505 156 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm24594-201ENSMUST00000122502 99 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm25241-201ENSMUST00000174909 84 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm26217-201ENSMUST00000175212 84 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm29140-201ENSMUST00000190187 476 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm3702-201ENSMUST00000211754 346 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm19572-201ENSMUST00000214326 338 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm25634-201ENSMUST00000082667 105 ntBASIC0.27□□□□□ -2.37
Lire1P11260 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
Lire1P11260 Gm13797-201ENSMUST00000121792 120 ntBASIC0.26□□□□□ -2.37
Lire1P11260 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.26□□□□□ -2.37
Lire1P11260 Gm24559-201ENSMUST00000157519 121 ntBASIC0.26□□□□□ -2.37
Lire1P11260 Gm25664-201ENSMUST00000157697 107 ntBASIC0.26□□□□□ -2.37
Lire1P11260 Gm22242-201ENSMUST00000175224 118 ntBASIC0.26□□□□□ -2.37
Lire1P11260 Gm7240-201ENSMUST00000220769 664 ntBASIC0.26□□□□□ -2.37
Lire1P11260 Gm24423-201ENSMUST00000101982 106 ntBASIC0.25□□□□□ -2.37
Lire1P11260 Gm22051-201ENSMUST00000117002 127 ntBASIC0.25□□□□□ -2.37
Lire1P11260 Gm12797-201ENSMUST00000118645 273 ntBASIC0.25□□□□□ -2.37
Lire1P11260 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.25□□□□□ -2.37
Lire1P11260 Gm23219-201ENSMUST00000158123 87 ntBASIC0.25□□□□□ -2.37
Lire1P11260 Gm23020-201ENSMUST00000158766 253 ntBASIC0.25□□□□□ -2.37
Lire1P11260 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.25□□□□□ -2.37
Lire1P11260 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.25□□□□□ -2.37
Lire1P11260 Mir6365-201ENSMUST00000183990 101 ntBASIC0.25□□□□□ -2.37
Lire1P11260 Mir6896-201ENSMUST00000198033 73 ntBASIC0.25□□□□□ -2.37
Lire1P11260 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.25□□□□□ -2.37
Lire1P11260 Gm24833-201ENSMUST00000116775 120 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm14039-201ENSMUST00000118705 101 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm11904-201ENSMUST00000120562 248 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm25318-201ENSMUST00000122554 314 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm25323-201ENSMUST00000122555 103 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm24635-201ENSMUST00000122712 128 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm22767-201ENSMUST00000158365 165 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Mir6377-201ENSMUST00000183760 114 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm28579-201ENSMUST00000186143 369 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm44977-201ENSMUST00000205283 420 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm22571-201ENSMUST00000082984 70 ntBASIC0.24□□□□□ -2.37
Lire1P11260 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Lire1P11260 Gm25828-201ENSMUST00000157087 95 ntBASIC0.23□□□□□ -2.37
Lire1P11260 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Lire1P11260 Gm22686-201ENSMUST00000082847 100 ntBASIC0.23□□□□□ -2.37
Lire1P11260 Gm26123-201ENSMUST00000083363 135 ntBASIC0.23□□□□□ -2.37
Lire1P11260 Gm22048-201ENSMUST00000104721 89 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Gm23989-201ENSMUST00000117030 66 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Gm23655-201ENSMUST00000122627 105 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Scarna8-201ENSMUST00000158333 131 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Gm26402-201ENSMUST00000158499 113 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Gm17919-201ENSMUST00000173344 312 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Gm25235-201ENSMUST00000179933 107 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Gm28016-201ENSMUST00000184594 196 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Gm22576-201ENSMUST00000083733 104 ntBASIC0.22□□□□□ -2.37
Lire1P11260 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Lire1P11260 Gm11204-201ENSMUST00000122438 147 ntBASIC0.21□□□□□ -2.38
Lire1P11260 Gm23838-201ENSMUST00000158067 162 ntBASIC0.21□□□□□ -2.38
Lire1P11260 Gm25494-201ENSMUST00000158143 100 ntBASIC0.21□□□□□ -2.38
Lire1P11260 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.21□□□□□ -2.38
Lire1P11260 Snord95-201ENSMUST00000082846 68 ntBASIC0.21□□□□□ -2.38
Lire1P11260 Mir200a-201ENSMUST00000083466 90 ntBASIC0.21□□□□□ -2.38
Lire1P11260 Gm24509-201ENSMUST00000157086 101 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Gm25358-201ENSMUST00000157189 101 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Gm24728-201ENSMUST00000158226 125 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Gm23763-201ENSMUST00000158345 60 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Gm22836-201ENSMUST00000158441 61 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Mir669k-201ENSMUST00000177742 127 ntBASIC0.2□□□□□ -2.38
Lire1P11260 Gm23002-201ENSMUST00000179221 107 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms