Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.76□□□□□ -2.13
Col3a1P08121 Gm45288-201ENSMUST00000210236 151 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Col3a1P08121 Gm23244-201ENSMUST00000083375 92 ntBASIC1.76□□□□□ -2.13
Col3a1P08121 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
Col3a1P08121 Gm14567-201ENSMUST00000117155 174 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm14923-201ENSMUST00000118270 155 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm25828-201ENSMUST00000157087 95 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm25976-201ENSMUST00000158695 130 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm25364-201ENSMUST00000158851 107 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Mir6394-201ENSMUST00000184738 99 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Mir7052-201ENSMUST00000184821 65 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.75□□□□□ -2.13
Col3a1P08121 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.75□□□□□ -2.13
Col3a1P08121 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm24977-201ENSMUST00000083106 163 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm22972-201ENSMUST00000083297 131 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm23038-201ENSMUST00000083873 104 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
Col3a1P08121 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col3a1P08121 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm22678-201ENSMUST00000116974 101 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm14502-201ENSMUST00000118154 113 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm24896-201ENSMUST00000122741 135 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm22790-201ENSMUST00000157229 129 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm24246-201ENSMUST00000157315 132 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm24718-201ENSMUST00000157521 136 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm23122-201ENSMUST00000157645 103 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm26435-201ENSMUST00000179026 107 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm27672-201ENSMUST00000183751 204 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Mir6985-201ENSMUST00000184641 61 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.75□□□□□ -2.13
Col3a1P08121 Gm15289-201ENSMUST00000117793 244 ntBASIC1.74□□□□□ -2.13
Col3a1P08121 Gm26104-201ENSMUST00000157250 108 ntBASIC1.74□□□□□ -2.13
Col3a1P08121 Gm44459-201ENSMUST00000203926 160 ntBASIC1.74□□□□□ -2.13
Col3a1P08121 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col3a1P08121 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Col3a1P08121 Gm22935-201ENSMUST00000103960 104 ntBASIC1.73□□□□□ -2.13
Col3a1P08121 Gm22033-201ENSMUST00000116947 90 ntBASIC1.73□□□□□ -2.13
Col3a1P08121 Gm25367-201ENSMUST00000158846 106 ntBASIC1.73□□□□□ -2.13
Col3a1P08121 Gm20613-201ENSMUST00000175828 345 ntBASIC1.73□□□□□ -2.13
Col3a1P08121 Gm22510-201ENSMUST00000179304 79 ntBASIC1.73□□□□□ -2.13
Col3a1P08121 Gm26336-201ENSMUST00000179449 79 ntBASIC1.73□□□□□ -2.13
Col3a1P08121 Gm26390-201ENSMUST00000179628 79 ntBASIC1.73□□□□□ -2.13
Col3a1P08121 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.73□□□□□ -2.13
Col3a1P08121 Gm24406-201ENSMUST00000083026 128 ntBASIC1.73□□□□□ -2.13
Col3a1P08121 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col3a1P08121 Gm22270-201ENSMUST00000104034 132 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm26051-201ENSMUST00000104642 93 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm14947-201ENSMUST00000133704 303 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm23469-201ENSMUST00000157131 104 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm23324-201ENSMUST00000157421 131 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm22943-201ENSMUST00000158564 76 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm42960-201ENSMUST00000202160 241 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm44057-201ENSMUST00000204547 96 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm23247-201ENSMUST00000083373 107 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm23040-201ENSMUST00000083869 163 ntBASIC1.72□□□□□ -2.13
Col3a1P08121 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col3a1P08121 Gm24126-201ENSMUST00000104111 106 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm25825-201ENSMUST00000157091 124 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm25933-201ENSMUST00000178943 108 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm22069-201ENSMUST00000179911 107 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Col3a1P08121 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Col3a1P08121 Mir7063-201ENSMUST00000184158 91 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm43206-201ENSMUST00000197990 114 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm44024-201ENSMUST00000203008 476 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm45791-201ENSMUST00000212908 352 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm25588-201ENSMUST00000082501 140 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Mir448-201ENSMUST00000083516 112 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.71□□□□□ -2.14
Col3a1P08121 Gm44489-201ENSMUST00000104619 97 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm14568-201ENSMUST00000119321 294 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm25544-201ENSMUST00000122676 120 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm22221-201ENSMUST00000157362 103 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm23221-201ENSMUST00000158118 93 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm23567-201ENSMUST00000178005 107 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm27792-201ENSMUST00000184031 115 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Col3a1P08121 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.7□□□□□ -2.14
Col3a1P08121 Gm24624-201ENSMUST00000082617 164 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm25851-201ENSMUST00000082794 107 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm23509-201ENSMUST00000083080 160 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Mir340-201ENSMUST00000083483 98 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm24252-201ENSMUST00000083700 132 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Gm26168-201ENSMUST00000083787 112 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col3a1P08121 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col3a1P08121 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.7□□□□□ -2.14
Col3a1P08121 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col3a1P08121 Gm22780-201ENSMUST00000104084 132 ntBASIC1.69□□□□□ -2.14
Col3a1P08121 Gm12013-201ENSMUST00000121971 155 ntBASIC1.69□□□□□ -2.14
Col3a1P08121 Gm23859-201ENSMUST00000158383 64 ntBASIC1.69□□□□□ -2.14
Col3a1P08121 Gm23858-201ENSMUST00000158384 106 ntBASIC1.69□□□□□ -2.14
Col3a1P08121 Gm24837-201ENSMUST00000158683 81 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 165.4 ms