Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Mir6896-201ENSMUST00000198033 73 ntBASIC0.21□□□□□ -2.38
TnfP06804 Gm43944-201ENSMUST00000205220 120 ntBASIC0.21□□□□□ -2.38
TnfP06804 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.21□□□□□ -2.38
TnfP06804 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.2□□□□□ -2.38
TnfP06804 Gm25241-201ENSMUST00000174909 84 ntBASIC0.2□□□□□ -2.38
TnfP06804 Gm26217-201ENSMUST00000175212 84 ntBASIC0.2□□□□□ -2.38
TnfP06804 Gm12924-201ENSMUST00000121747 318 ntBASIC0.19□□□□□ -2.38
TnfP06804 Gm23655-201ENSMUST00000122627 105 ntBASIC0.19□□□□□ -2.38
TnfP06804 Gm24635-201ENSMUST00000122712 128 ntBASIC0.19□□□□□ -2.38
TnfP06804 Gm25664-201ENSMUST00000157697 107 ntBASIC0.19□□□□□ -2.38
TnfP06804 Gm29140-201ENSMUST00000190187 476 ntBASIC0.19□□□□□ -2.38
TnfP06804 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
TnfP06804 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.19□□□□□ -2.38
TnfP06804 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.19□□□□□ -2.38
TnfP06804 Gm23989-201ENSMUST00000117030 66 ntBASIC0.18□□□□□ -2.38
TnfP06804 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.18□□□□□ -2.38
TnfP06804 Gm25718-201ENSMUST00000158632 118 ntBASIC0.18□□□□□ -2.38
TnfP06804 Gm27521-201ENSMUST00000184022 64 ntBASIC0.18□□□□□ -2.38
TnfP06804 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.18□□□□□ -2.38
TnfP06804 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.18□□□□□ -2.38
TnfP06804 Gm22784-201ENSMUST00000104088 132 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm24833-201ENSMUST00000116775 120 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm12797-201ENSMUST00000118645 273 ntBASIC0.17□□□□□ -2.38
TnfP06804 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TnfP06804 Gm24392-201ENSMUST00000158136 103 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm22767-201ENSMUST00000158365 165 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm26287-201ENSMUST00000158887 81 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm24667-201ENSMUST00000158938 103 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm22239-201ENSMUST00000175220 103 ntBASIC0.17□□□□□ -2.38
TnfP06804 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.17□□□□□ -2.38
TnfP06804 Gm24415-201ENSMUST00000180218 107 ntBASIC0.17□□□□□ -2.38
TnfP06804 Mir6365-201ENSMUST00000183990 101 ntBASIC0.17□□□□□ -2.38
TnfP06804 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TnfP06804 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm23406-201ENSMUST00000082537 122 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm25634-201ENSMUST00000082667 105 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm22576-201ENSMUST00000083733 104 ntBASIC0.17□□□□□ -2.38
TnfP06804 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
TnfP06804 Gm13797-201ENSMUST00000121792 120 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm24509-201ENSMUST00000157086 101 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm25828-201ENSMUST00000157087 95 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm25358-201ENSMUST00000157189 101 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm25494-201ENSMUST00000158143 100 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm26159-201ENSMUST00000158968 104 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm25247-201ENSMUST00000175475 90 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm28008-201ENSMUST00000184021 186 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm26447-201ENSMUST00000082448 129 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm26123-201ENSMUST00000083363 135 ntBASIC0.16□□□□□ -2.38
TnfP06804 Gm24594-201ENSMUST00000122502 99 ntBASIC0.15□□□□□ -2.39
TnfP06804 Gm25323-201ENSMUST00000122555 103 ntBASIC0.15□□□□□ -2.39
TnfP06804 Gm19572-201ENSMUST00000214326 338 ntBASIC0.15□□□□□ -2.39
TnfP06804 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
TnfP06804 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.14□□□□□ -2.39
TnfP06804 Gm22051-201ENSMUST00000117002 127 ntBASIC0.14□□□□□ -2.39
TnfP06804 Gm22340-201ENSMUST00000157717 114 ntBASIC0.14□□□□□ -2.39
TnfP06804 Scarna8-201ENSMUST00000158333 131 ntBASIC0.14□□□□□ -2.39
TnfP06804 Mir7010-201ENSMUST00000183464 63 ntBASIC0.14□□□□□ -2.39
TnfP06804 Gm27402-201ENSMUST00000183890 120 ntBASIC0.14□□□□□ -2.39
TnfP06804 Gm44977-201ENSMUST00000205283 420 ntBASIC0.14□□□□□ -2.39
TnfP06804 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.14□□□□□ -2.39
TnfP06804 Gm24728-201ENSMUST00000158226 125 ntBASIC0.13□□□□□ -2.39
TnfP06804 Gm26402-201ENSMUST00000158499 113 ntBASIC0.13□□□□□ -2.39
TnfP06804 Gm25161-201ENSMUST00000158913 132 ntBASIC0.13□□□□□ -2.39
TnfP06804 Mir3108-201ENSMUST00000175500 79 ntBASIC0.13□□□□□ -2.39
TnfP06804 Mir6390-201ENSMUST00000184405 129 ntBASIC0.13□□□□□ -2.39
TnfP06804 Gm44457-201ENSMUST00000198109 76 ntBASIC0.13□□□□□ -2.39
TnfP06804 Gm44468-201ENSMUST00000199516 105 ntBASIC0.13□□□□□ -2.39
TnfP06804 Gm43505-201ENSMUST00000200579 139 ntBASIC0.13□□□□□ -2.39
TnfP06804 Gm3702-201ENSMUST00000211754 346 ntBASIC0.13□□□□□ -2.39
TnfP06804 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.13□□□□□ -2.39
TnfP06804 Gm22686-201ENSMUST00000082847 100 ntBASIC0.13□□□□□ -2.39
TnfP06804 Mir532-201ENSMUST00000093630 96 ntBASIC0.13□□□□□ -2.39
TnfP06804 Mir669k-201ENSMUST00000177742 127 ntBASIC0.12□□□□□ -2.39
TnfP06804 Gm25673-201ENSMUST00000179957 127 ntBASIC0.12□□□□□ -2.39
TnfP06804 Gm45313-201ENSMUST00000210584 178 ntBASIC0.12□□□□□ -2.39
TnfP06804 Gm22571-201ENSMUST00000082984 70 ntBASIC0.12□□□□□ -2.39
TnfP06804 Mir382-201ENSMUST00000083494 76 ntBASIC0.12□□□□□ -2.39
TnfP06804 Gm22753-201ENSMUST00000083657 107 ntBASIC0.12□□□□□ -2.39
TnfP06804 Gm10222-201ENSMUST00000088336 294 ntBASIC0.12□□□□□ -2.39
TnfP06804 Gm24423-201ENSMUST00000101982 106 ntBASIC0.11□□□□□ -2.39
TnfP06804 Gm26076-201ENSMUST00000104065 105 ntBASIC0.11□□□□□ -2.39
TnfP06804 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.11□□□□□ -2.39
TnfP06804 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.11□□□□□ -2.39
TnfP06804 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.11□□□□□ -2.39
TnfP06804 Mir200a-201ENSMUST00000083466 90 ntBASIC0.11□□□□□ -2.39
TnfP06804 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TnfP06804 Gm23219-201ENSMUST00000158123 87 ntBASIC0.1□□□□□ -2.39
TnfP06804 Gm25375-201ENSMUST00000158157 135 ntBASIC0.1□□□□□ -2.39
TnfP06804 Gm22520-201ENSMUST00000158269 129 ntBASIC0.1□□□□□ -2.39
TnfP06804 Gm25235-201ENSMUST00000179933 107 ntBASIC0.1□□□□□ -2.39
TnfP06804 Gm26293-201ENSMUST00000104170 84 ntBASIC0.09□□□□□ -2.4
TnfP06804 Gm16186-201ENSMUST00000120132 216 ntBASIC0.09□□□□□ -2.4
TnfP06804 Gm22999-201ENSMUST00000157082 88 ntBASIC0.09□□□□□ -2.4
TnfP06804 Gm22088-201ENSMUST00000158341 117 ntBASIC0.09□□□□□ -2.4
TnfP06804 Gm23761-201ENSMUST00000158347 104 ntBASIC0.09□□□□□ -2.4
TnfP06804 Gm25444-201ENSMUST00000158999 113 ntBASIC0.09□□□□□ -2.4
TnfP06804 Gm25952-201ENSMUST00000175329 74 ntBASIC0.09□□□□□ -2.4
TnfP06804 Mir7229-201ENSMUST00000197062 53 ntBASIC0.09□□□□□ -2.4
TnfP06804 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.09□□□□□ -2.4
TnfP06804 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms