Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm17528-201ENSMUST00000171026 239 ntBASIC1.44□□□□□ -2.18
Hcn3O88705 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.44□□□□□ -2.18
Hcn3O88705 Gm44408-201ENSMUST00000200205 66 ntBASIC1.44□□□□□ -2.18
Hcn3O88705 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.44□□□□□ -2.18
Hcn3O88705 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.44□□□□□ -2.18
Hcn3O88705 Mir148b-201ENSMUST00000083626 97 ntBASIC1.44□□□□□ -2.18
Hcn3O88705 Gm26018-201ENSMUST00000104406 128 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Gm22373-201ENSMUST00000104584 89 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Gm25769-201ENSMUST00000158569 127 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Gm22200-201ENSMUST00000158614 67 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Traj60-201ENSMUST00000167781 54 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Mir7225-201ENSMUST00000184178 54 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Gm28862-201ENSMUST00000188246 163 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Gm16976-205ENSMUST00000227324 226 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Gm25650-201ENSMUST00000083784 162 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.43□□□□□ -2.18
Hcn3O88705 Gm26420-201ENSMUST00000104273 103 ntBASIC1.42□□□□□ -2.18
Hcn3O88705 Snora24-201ENSMUST00000174989 130 ntBASIC1.42□□□□□ -2.18
Hcn3O88705 Gm18433-201ENSMUST00000192747 197 ntBASIC1.42□□□□□ -2.18
Hcn3O88705 Gm44358-201ENSMUST00000196301 98 ntBASIC1.42□□□□□ -2.18
Hcn3O88705 Gm25136-201ENSMUST00000083253 115 ntBASIC1.42□□□□□ -2.18
Hcn3O88705 Gm26076-201ENSMUST00000104065 105 ntBASIC1.41□□□□□ -2.18
Hcn3O88705 Gm24588-201ENSMUST00000116696 83 ntBASIC1.41□□□□□ -2.18
Hcn3O88705 Gm26412-201ENSMUST00000157666 55 ntBASIC1.41□□□□□ -2.18
Hcn3O88705 Gm16539-201ENSMUST00000160086 327 ntBASIC1.41□□□□□ -2.18
Hcn3O88705 Snord61-201ENSMUST00000083176 71 ntBASIC1.41□□□□□ -2.18
Hcn3O88705 Gm22576-201ENSMUST00000083733 104 ntBASIC1.41□□□□□ -2.18
Hcn3O88705 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Hcn3O88705 Gm22105-201ENSMUST00000116734 116 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 Gm22999-201ENSMUST00000157082 88 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 Gm25980-201ENSMUST00000157176 218 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 Gm22556-201ENSMUST00000157803 100 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 Gm23289-201ENSMUST00000175615 108 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 Gm28256-201ENSMUST00000188953 139 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 Gm18665-201ENSMUST00000189783 270 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 Gm28559-201ENSMUST00000190532 139 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.4□□□□□ -2.19
Hcn3O88705 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.39□□□□□ -2.19
Hcn3O88705 Gm14568-201ENSMUST00000119321 294 ntBASIC1.39□□□□□ -2.19
Hcn3O88705 Gm12309-201ENSMUST00000119889 182 ntBASIC1.39□□□□□ -2.19
Hcn3O88705 Gm22914-201ENSMUST00000175195 77 ntBASIC1.39□□□□□ -2.19
Hcn3O88705 Gm37545-201ENSMUST00000186512 148 ntBASIC1.39□□□□□ -2.19
Hcn3O88705 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Hcn3O88705 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.39□□□□□ -2.19
Hcn3O88705 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.39□□□□□ -2.19
Hcn3O88705 Gm14502-201ENSMUST00000118154 113 ntBASIC1.38□□□□□ -2.19
Hcn3O88705 Snord13-201ENSMUST00000157627 104 ntBASIC1.38□□□□□ -2.19
Hcn3O88705 Gm24638-201ENSMUST00000179807 132 ntBASIC1.38□□□□□ -2.19
Hcn3O88705 Gm16399-201ENSMUST00000181423 219 ntBASIC1.38□□□□□ -2.19
Hcn3O88705 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.38□□□□□ -2.19
Hcn3O88705 Mir3969-201ENSMUST00000197106 92 ntBASIC1.38□□□□□ -2.19
Hcn3O88705 Gm18213-201ENSMUST00000207850 178 ntBASIC1.38□□□□□ -2.19
Hcn3O88705 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.38□□□□□ -2.19
Hcn3O88705 Gm25081-201ENSMUST00000082534 108 ntBASIC1.38□□□□□ -2.19
Hcn3O88705 Gm23947-201ENSMUST00000093636 107 ntBASIC1.38□□□□□ -2.19
Hcn3O88705 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Hcn3O88705 Mir301b-201ENSMUST00000102333 97 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm24250-201ENSMUST00000157320 135 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm25044-201ENSMUST00000158603 104 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm23375-201ENSMUST00000175407 83 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm23770-201ENSMUST00000178009 108 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm22832-201ENSMUST00000178022 108 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm23863-201ENSMUST00000178265 108 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm24828-201ENSMUST00000178507 108 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm23052-201ENSMUST00000178633 108 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm25729-201ENSMUST00000179050 108 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm25359-201ENSMUST00000179315 108 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm22624-201ENSMUST00000179913 108 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm27365-201ENSMUST00000184041 177 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm18502-201ENSMUST00000218679 199 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Mir320-201ENSMUST00000083594 82 ntBASIC1.37□□□□□ -2.19
Hcn3O88705 Gm25377-201ENSMUST00000104334 129 ntBASIC1.36□□□□□ -2.19
Hcn3O88705 Gm25011-201ENSMUST00000158398 126 ntBASIC1.36□□□□□ -2.19
Hcn3O88705 Gm23339-201ENSMUST00000158962 139 ntBASIC1.36□□□□□ -2.19
Hcn3O88705 Gm22286-201ENSMUST00000179708 107 ntBASIC1.36□□□□□ -2.19
Hcn3O88705 Gm23578-201ENSMUST00000103943 104 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Snord90-201ENSMUST00000104568 111 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Gm22079-201ENSMUST00000157592 106 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Gm23859-201ENSMUST00000158383 64 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Gm24001-201ENSMUST00000158463 85 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Gm25241-201ENSMUST00000174909 84 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Gm26217-201ENSMUST00000175212 84 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Gm22862-201ENSMUST00000178593 121 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Gm7258-201ENSMUST00000179317 300 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.35□□□□□ -2.19
Hcn3O88705 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Hcn3O88705 Gm23558-201ENSMUST00000157823 80 ntBASIC1.34□□□□□ -2.19
Hcn3O88705 Gm25831-201ENSMUST00000158924 163 ntBASIC1.34□□□□□ -2.19
Hcn3O88705 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.34□□□□□ -2.19
Hcn3O88705 Gm26123-201ENSMUST00000083363 135 ntBASIC1.34□□□□□ -2.19
Hcn3O88705 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.34□□□□□ -2.2
Hcn3O88705 Gm25938-201ENSMUST00000104139 166 ntBASIC1.33□□□□□ -2.2
Hcn3O88705 Gm25832-201ENSMUST00000104140 130 ntBASIC1.33□□□□□ -2.2
Hcn3O88705 Gm23907-201ENSMUST00000104595 189 ntBASIC1.33□□□□□ -2.2
Hcn3O88705 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms