Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Snord60-201ENSMUST00000082834 78 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.66□□□□□ -2.52
Hmgb3O54879 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Gm23474-201ENSMUST00000158884 75 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
Hmgb3O54879 Gm26400-201ENSMUST00000175012 85 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.67□□□□□ -2.52
Hmgb3O54879 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.68□□□□□ -2.52
Hmgb3O54879 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.68□□□□□ -2.52
Hmgb3O54879 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.68□□□□□ -2.52
Hmgb3O54879 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.68□□□□□ -2.52
Hmgb3O54879 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.68□□□□□ -2.52
Hmgb3O54879 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.68□□□□□ -2.52
Hmgb3O54879 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 AC192616.1-201ENSMUST00000221922 132 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 AC125311.1-201ENSMUST00000226950 220 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.69□□□□□ -2.52
Hmgb3O54879 Gm22149-201ENSMUST00000104442 136 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Snora19-201ENSMUST00000082962 132 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.7□□□□□ -2.52
Hmgb3O54879 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.71□□□□□ -2.52
Hmgb3O54879 Mir327-201ENSMUST00000199328 69 ntBASIC-0.71□□□□□ -2.52
Hmgb3O54879 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.71□□□□□ -2.52
Hmgb3O54879 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.71□□□□□ -2.52
Hmgb3O54879 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Hmgb3O54879 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.71□□□□□ -2.52
Hmgb3O54879 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.71□□□□□ -2.52
Hmgb3O54879 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.72□□□□□ -2.52
Hmgb3O54879 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.72□□□□□ -2.52
Hmgb3O54879 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.72□□□□□ -2.52
Hmgb3O54879 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.72□□□□□ -2.52
Hmgb3O54879 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.72□□□□□ -2.52
Hmgb3O54879 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.72□□□□□ -2.52
Hmgb3O54879 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.72□□□□□ -2.52
Hmgb3O54879 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.72□□□□□ -2.52
Hmgb3O54879 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.73□□□□□ -2.53
Hmgb3O54879 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.73□□□□□ -2.53
Hmgb3O54879 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.73□□□□□ -2.53
Hmgb3O54879 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.73□□□□□ -2.53
Hmgb3O54879 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.73□□□□□ -2.53
Hmgb3O54879 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.73□□□□□ -2.53
Hmgb3O54879 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.73□□□□□ -2.53
Hmgb3O54879 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.74□□□□□ -2.53
Hmgb3O54879 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.74□□□□□ -2.53
Hmgb3O54879 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.74□□□□□ -2.53
Hmgb3O54879 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.74□□□□□ -2.53
Hmgb3O54879 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.74□□□□□ -2.53
Hmgb3O54879 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.74□□□□□ -2.53
Hmgb3O54879 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.75□□□□□ -2.53
Hmgb3O54879 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.75□□□□□ -2.53
Hmgb3O54879 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.75□□□□□ -2.53
Hmgb3O54879 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.75□□□□□ -2.53
Hmgb3O54879 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.75□□□□□ -2.53
Hmgb3O54879 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm24810-201ENSMUST00000175317 70 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Mir7039-201ENSMUST00000183852 85 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.76□□□□□ -2.53
Hmgb3O54879 Gm25052-201ENSMUST00000122661 158 ntBASIC-0.77□□□□□ -2.53
Hmgb3O54879 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.77□□□□□ -2.53
Hmgb3O54879 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.77□□□□□ -2.53
Hmgb3O54879 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
Hmgb3O54879 Mir759-201ENSMUST00000103254 98 ntBASIC-0.78□□□□□ -2.53
Hmgb3O54879 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
Hmgb3O54879 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.78□□□□□ -2.53
Hmgb3O54879 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.78□□□□□ -2.53
Hmgb3O54879 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.78□□□□□ -2.53
Hmgb3O54879 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.78□□□□□ -2.53
Hmgb3O54879 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms