Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm25958-201ENSMUST00000175114 71 ntBASIC1.38□□□□□ -2.19
Capn1O35350 Gm28256-201ENSMUST00000188953 139 ntBASIC1.38□□□□□ -2.19
Capn1O35350 Gm28559-201ENSMUST00000190532 139 ntBASIC1.38□□□□□ -2.19
Capn1O35350 Mir410-201ENSMUST00000083563 81 ntBASIC1.38□□□□□ -2.19
Capn1O35350 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.38□□□□□ -2.19
Capn1O35350 Gm24895-201ENSMUST00000122742 74 ntBASIC1.37□□□□□ -2.19
Capn1O35350 Gm22815-201ENSMUST00000157451 62 ntBASIC1.37□□□□□ -2.19
Capn1O35350 Snord13-201ENSMUST00000157627 104 ntBASIC1.37□□□□□ -2.19
Capn1O35350 Gm24808-201ENSMUST00000157993 118 ntBASIC1.37□□□□□ -2.19
Capn1O35350 Gm27365-201ENSMUST00000184041 177 ntBASIC1.37□□□□□ -2.19
Capn1O35350 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.37□□□□□ -2.19
Capn1O35350 Gm25128-201ENSMUST00000083339 76 ntBASIC1.37□□□□□ -2.19
Capn1O35350 Gm22559-201ENSMUST00000157329 134 ntBASIC1.36□□□□□ -2.19
Capn1O35350 Gm22946-201ENSMUST00000158558 82 ntBASIC1.36□□□□□ -2.19
Capn1O35350 Gm16546-201ENSMUST00000159442 355 ntBASIC1.36□□□□□ -2.19
Capn1O35350 Gm16539-201ENSMUST00000160086 327 ntBASIC1.36□□□□□ -2.19
Capn1O35350 Gm27326-201ENSMUST00000183504 95 ntBASIC1.36□□□□□ -2.19
Capn1O35350 Gm44483-201ENSMUST00000197203 97 ntBASIC1.36□□□□□ -2.19
Capn1O35350 Gm42988-201ENSMUST00000198116 225 ntBASIC1.36□□□□□ -2.19
Capn1O35350 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.36□□□□□ -2.19
Capn1O35350 Gm11857-201ENSMUST00000119817 324 ntBASIC1.35□□□□□ -2.19
Capn1O35350 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.35□□□□□ -2.19
Capn1O35350 Gm22963-201ENSMUST00000157960 91 ntBASIC1.35□□□□□ -2.19
Capn1O35350 Gm22606-201ENSMUST00000158290 103 ntBASIC1.35□□□□□ -2.19
Capn1O35350 Gm22612-201ENSMUST00000158293 101 ntBASIC1.35□□□□□ -2.19
Capn1O35350 Gm22663-201ENSMUST00000158721 102 ntBASIC1.35□□□□□ -2.19
Capn1O35350 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm23558-201ENSMUST00000157823 80 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm24750-201ENSMUST00000157843 104 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm25044-201ENSMUST00000158603 104 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm22944-201ENSMUST00000158662 133 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm24221-201ENSMUST00000158833 313 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm23375-201ENSMUST00000175407 83 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm44462-201ENSMUST00000199696 129 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm44922-201ENSMUST00000206690 90 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm25588-201ENSMUST00000082501 140 ntBASIC1.34□□□□□ -2.19
Capn1O35350 Gm26326-201ENSMUST00000083070 129 ntBASIC1.34□□□□□ -2.19
Capn1O35350 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.33□□□□□ -2.2
Capn1O35350 Gm25241-201ENSMUST00000174909 84 ntBASIC1.33□□□□□ -2.2
Capn1O35350 Gm26217-201ENSMUST00000175212 84 ntBASIC1.33□□□□□ -2.2
Capn1O35350 Mir7665-201ENSMUST00000184907 63 ntBASIC1.33□□□□□ -2.2
Capn1O35350 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.33□□□□□ -2.2
Capn1O35350 Gm26123-201ENSMUST00000083363 135 ntBASIC1.33□□□□□ -2.2
Capn1O35350 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
Capn1O35350 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.32□□□□□ -2.2
Capn1O35350 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.32□□□□□ -2.2
Capn1O35350 Gm23766-201ENSMUST00000103894 80 ntBASIC1.32□□□□□ -2.2
Capn1O35350 Gm23772-201ENSMUST00000104433 102 ntBASIC1.32□□□□□ -2.2
Capn1O35350 Gm23122-201ENSMUST00000157645 103 ntBASIC1.32□□□□□ -2.2
Capn1O35350 Gm23080-201ENSMUST00000157846 103 ntBASIC1.32□□□□□ -2.2
Capn1O35350 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Capn1O35350 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Capn1O35350 Gm23336-201ENSMUST00000117023 123 ntBASIC1.31□□□□□ -2.2
Capn1O35350 Gm16307-201ENSMUST00000161269 210 ntBASIC1.31□□□□□ -2.2
Capn1O35350 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.31□□□□□ -2.2
Capn1O35350 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Capn1O35350 Gm44396-201ENSMUST00000199843 114 ntBASIC1.31□□□□□ -2.2
Capn1O35350 Gm43911-201ENSMUST00000203097 76 ntBASIC1.31□□□□□ -2.2
Capn1O35350 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.31□□□□□ -2.2
Capn1O35350 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.31□□□□□ -2.2
Capn1O35350 Mir488-201ENSMUST00000093595 109 ntBASIC1.31□□□□□ -2.2
Capn1O35350 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.31□□□□□ -2.2
Capn1O35350 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Capn1O35350 Mir547-201ENSMUST00000102051 78 ntBASIC1.3□□□□□ -2.2
Capn1O35350 Gm26049-201ENSMUST00000157313 108 ntBASIC1.3□□□□□ -2.2
Capn1O35350 Gm25769-201ENSMUST00000158569 127 ntBASIC1.3□□□□□ -2.2
Capn1O35350 Gm27934-201ENSMUST00000158795 63 ntBASIC1.3□□□□□ -2.2
Capn1O35350 Gm26097-201ENSMUST00000179642 93 ntBASIC1.3□□□□□ -2.2
Capn1O35350 Gm43381-201ENSMUST00000198553 165 ntBASIC1.3□□□□□ -2.2
Capn1O35350 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Capn1O35350 Gm24271-201ENSMUST00000102327 111 ntBASIC1.29□□□□□ -2.2
Capn1O35350 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.29□□□□□ -2.2
Capn1O35350 Gm27894-201ENSMUST00000184177 92 ntBASIC1.29□□□□□ -2.2
Capn1O35350 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.29□□□□□ -2.2
Capn1O35350 Gm22809-201ENSMUST00000082743 156 ntBASIC1.29□□□□□ -2.2
Capn1O35350 Gm22169-201ENSMUST00000083229 107 ntBASIC1.29□□□□□ -2.2
Capn1O35350 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Gm24232-201ENSMUST00000104314 132 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Gm12309-201ENSMUST00000119889 182 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Gm23221-201ENSMUST00000158118 93 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Gm22515-201ENSMUST00000158273 305 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Gm26403-201ENSMUST00000158500 105 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Mir7039-201ENSMUST00000183852 85 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Gm25401-201ENSMUST00000082975 106 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Mir201-201ENSMUST00000083470 66 ntBASIC1.28□□□□□ -2.2
Capn1O35350 Gm23130-201ENSMUST00000104252 74 ntBASIC1.27□□□□□ -2.21
Capn1O35350 Gm24401-201ENSMUST00000157868 91 ntBASIC1.27□□□□□ -2.21
Capn1O35350 Gm22074-201ENSMUST00000158595 113 ntBASIC1.27□□□□□ -2.21
Capn1O35350 Mir3098-201ENSMUST00000175416 87 ntBASIC1.27□□□□□ -2.21
Capn1O35350 Gm22348-201ENSMUST00000178674 79 ntBASIC1.27□□□□□ -2.21
Capn1O35350 Gm44976-201ENSMUST00000205543 261 ntBASIC1.27□□□□□ -2.21
Capn1O35350 Gm8219-201ENSMUST00000218309 242 ntBASIC1.27□□□□□ -2.21
Capn1O35350 Snord72-201ENSMUST00000104549 81 ntBASIC1.26□□□□□ -2.21
Capn1O35350 Mir1298-201ENSMUST00000116681 98 ntBASIC1.26□□□□□ -2.21
Capn1O35350 Gm22337-201ENSMUST00000157721 132 ntBASIC1.26□□□□□ -2.21
Capn1O35350 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.26□□□□□ -2.21
Capn1O35350 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.26□□□□□ -2.21
Capn1O35350 Mir709-201ENSMUST00000102190 88 ntBASIC1.25□□□□□ -2.21
Capn1O35350 Gm26420-201ENSMUST00000104273 103 ntBASIC1.25□□□□□ -2.21
Capn1O35350 Mir468-201ENSMUST00000197332 78 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms