Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Gm44932-201ENSMUST00000206799 121 ntBASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Snord104-201ENSMUST00000083192 70 ntBASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Gm22251-201ENSMUST00000083216 107 ntBASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Ccdc9bA3KGF9 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Mir682-201ENSMUST00000102281 96 ntBASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Gm23766-201ENSMUST00000103894 80 ntBASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Gm24771-201ENSMUST00000158508 137 ntBASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Gm27786-201ENSMUST00000184337 70 ntBASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Ccdc9bA3KGF9 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.37□□□□□ -2.03
Ccdc9bA3KGF9 Gm25090-201ENSMUST00000104000 132 ntBASIC2.37□□□□□ -2.03
Ccdc9bA3KGF9 Gm26015-201ENSMUST00000104402 125 ntBASIC2.37□□□□□ -2.03
Ccdc9bA3KGF9 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.37□□□□□ -2.03
Ccdc9bA3KGF9 Gm23996-201ENSMUST00000158062 131 ntBASIC2.37□□□□□ -2.03
Ccdc9bA3KGF9 Gm24082-201ENSMUST00000175175 83 ntBASIC2.37□□□□□ -2.03
Ccdc9bA3KGF9 Gm27979-201ENSMUST00000185126 56 ntBASIC2.37□□□□□ -2.03
Ccdc9bA3KGF9 Snord43-201ENSMUST00000199549 108 ntBASIC2.37□□□□□ -2.03
Ccdc9bA3KGF9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Gm24280-201ENSMUST00000104237 134 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Gm23551-201ENSMUST00000116852 121 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Gm15536-201ENSMUST00000121411 114 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Gm25866-201ENSMUST00000158245 112 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Mir7242-201ENSMUST00000183710 79 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Gm19257-201ENSMUST00000186121 183 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Gm26458-201ENSMUST00000082832 128 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Mir451a-201ENSMUST00000093557 72 ntBASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.36□□□□□ -2.03
Ccdc9bA3KGF9 Mir3569-201ENSMUST00000185080 58 ntBASIC2.35□□□□□ -2.03
Ccdc9bA3KGF9 Gm44555-201ENSMUST00000209008 148 ntBASIC2.35□□□□□ -2.03
Ccdc9bA3KGF9 Snora41-201ENSMUST00000082668 132 ntBASIC2.35□□□□□ -2.03
Ccdc9bA3KGF9 DQ267100-201ENSMUST00000122600 72 ntBASIC2.34□□□□□ -2.03
Ccdc9bA3KGF9 Gm24291-201ENSMUST00000157633 162 ntBASIC2.34□□□□□ -2.03
Ccdc9bA3KGF9 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Gm22772-201ENSMUST00000104451 121 ntBASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Gm22815-201ENSMUST00000157451 62 ntBASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Gm26213-201ENSMUST00000158582 110 ntBASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Gm45471-201ENSMUST00000211270 281 ntBASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Mir423-201ENSMUST00000083584 109 ntBASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Mir151-201ENSMUST00000083678 68 ntBASIC2.33□□□□□ -2.04
Ccdc9bA3KGF9 Gm25750-201ENSMUST00000175483 112 ntBASIC2.32□□□□□ -2.04
Ccdc9bA3KGF9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.32□□□□□ -2.04
Ccdc9bA3KGF9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.32□□□□□ -2.04
Ccdc9bA3KGF9 Gm23038-201ENSMUST00000083873 104 ntBASIC2.32□□□□□ -2.04
Ccdc9bA3KGF9 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.31□□□□□ -2.04
Ccdc9bA3KGF9 Gm25610-201ENSMUST00000104016 129 ntBASIC2.31□□□□□ -2.04
Ccdc9bA3KGF9 Snord78-201ENSMUST00000104032 66 ntBASIC2.31□□□□□ -2.04
Ccdc9bA3KGF9 Traj61-201ENSMUST00000165025 72 ntBASIC2.31□□□□□ -2.04
Ccdc9bA3KGF9 Gm22884-201ENSMUST00000083127 140 ntBASIC2.31□□□□□ -2.04
Ccdc9bA3KGF9 Mir93-201ENSMUST00000083593 88 ntBASIC2.31□□□□□ -2.04
Ccdc9bA3KGF9 Gm22866-201ENSMUST00000083947 177 ntBASIC2.31□□□□□ -2.04
Ccdc9bA3KGF9 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc9bA3KGF9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Gm14674-201ENSMUST00000117816 342 ntBASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Gm23889-201ENSMUST00000122689 104 ntBASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Mir1949-201ENSMUST00000157434 141 ntBASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Gm25887-201ENSMUST00000157777 84 ntBASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Gm24947-201ENSMUST00000158334 110 ntBASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Gm25241-201ENSMUST00000174909 84 ntBASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Gm26217-201ENSMUST00000175212 84 ntBASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Mir8116-201ENSMUST00000184134 97 ntBASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.3□□□□□ -2.04
Ccdc9bA3KGF9 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.29□□□□□ -2.04
Ccdc9bA3KGF9 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.29□□□□□ -2.04
Ccdc9bA3KGF9 Mir3083-201ENSMUST00000175377 64 ntBASIC2.29□□□□□ -2.04
Ccdc9bA3KGF9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.29□□□□□ -2.04
Ccdc9bA3KGF9 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm25611-201ENSMUST00000104017 133 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm16265-201ENSMUST00000134558 108 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm24649-201ENSMUST00000157106 134 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm26411-201ENSMUST00000157668 107 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm25994-201ENSMUST00000175392 101 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm27399-201ENSMUST00000184250 78 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm27369-201ENSMUST00000185182 71 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm22950-201ENSMUST00000082776 107 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm26123-201ENSMUST00000083363 135 ntBASIC2.28□□□□□ -2.04
Ccdc9bA3KGF9 Gm16328-201ENSMUST00000126985 196 ntBASIC2.27□□□□□ -2.05
Ccdc9bA3KGF9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.27□□□□□ -2.05
Ccdc9bA3KGF9 Mir6419-201ENSMUST00000184784 113 ntBASIC2.27□□□□□ -2.05
Ccdc9bA3KGF9 Gm42795-201ENSMUST00000198847 76 ntBASIC2.27□□□□□ -2.05
Ccdc9bA3KGF9 Gm24523-201ENSMUST00000083965 132 ntBASIC2.27□□□□□ -2.05
Ccdc9bA3KGF9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Gm23803-201ENSMUST00000104610 132 ntBASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Gm24436-201ENSMUST00000157889 302 ntBASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Mir7683-201ENSMUST00000183842 61 ntBASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc9bA3KGF9 Gm44807-201ENSMUST00000206115 154 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms