Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25909-201ENSMUST00000157619 121 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm27410-201ENSMUST00000183851 115 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm28917-201ENSMUST00000187294 237 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Snord60-201ENSMUST00000082834 78 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm26107-201ENSMUST00000083972 107 ntBASIC-0.75□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm23142-201ENSMUST00000101848 105 ntBASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm26240-201ENSMUST00000101893 105 ntBASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm44811-201ENSMUST00000209120 228 ntBASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.76□□□□□ -2.53
Trav9-4A0A0B4J1K2 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm44726-201ENSMUST00000203427 217 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm45402-201ENSMUST00000211796 223 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25579-201ENSMUST00000083407 106 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.77□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25317-201ENSMUST00000116824 129 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25314-201ENSMUST00000178810 79 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 AC167192.2-201ENSMUST00000224794 198 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm23448-201ENSMUST00000083151 104 ntBASIC-0.78□□□□□ -2.53
Trav9-4A0A0B4J1K2 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm14766-201ENSMUST00000121689 367 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm44487-201ENSMUST00000205145 325 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 AL929265.1-201ENSMUST00000213427 125 ntBASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.79□□□□□ -2.54
Trav9-4A0A0B4J1K2 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-0.8□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.8□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm25507-201ENSMUST00000116981 144 ntBASIC-0.8□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.8□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.8□□□□□ -2.54
Trav9-4A0A0B4J1K2 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.8□□□□□ -2.54
Trav9-4A0A0B4J1K2 Mir363-201ENSMUST00000093598 75 ntBASIC-0.8□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.8□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.81□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.81□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm23921-201ENSMUST00000175258 107 ntBASIC-0.81□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm27957-201ENSMUST00000184054 127 ntBASIC-0.81□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.81□□□□□ -2.54
Trav9-4A0A0B4J1K2 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.81□□□□□ -2.54
Trav9-4A0A0B4J1K2 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.82□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm23660-201ENSMUST00000178362 79 ntBASIC-0.82□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.82□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm24088-201ENSMUST00000179100 79 ntBASIC-0.82□□□□□ -2.54
Trav9-4A0A0B4J1K2 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.82□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.82□□□□□ -2.54
Trav9-4A0A0B4J1K2 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.82□□□□□ -2.54
Trav9-4A0A0B4J1K2 Mir465d-201ENSMUST00000196314 58 ntBASIC-0.83□□□□□ -2.54
Trav9-4A0A0B4J1K2 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.83□□□□□ -2.54
Trav9-4A0A0B4J1K2 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.83□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.83□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm25450-201ENSMUST00000179144 107 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 AC164297.5-201ENSMUST00000224365 198 ntBASIC-0.84□□□□□ -2.54
Trav9-4A0A0B4J1K2 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.85□□□□□ -2.55
Trav9-4A0A0B4J1K2 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 158.2 ms