Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm11322-201ENSMUST00000118095 435 ntBASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm13922-201ENSMUST00000119505 156 ntBASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm6272-201ENSMUST00000121256 171 ntBASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm25318-201ENSMUST00000122554 314 ntBASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm23416-201ENSMUST00000175520 95 ntBASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Mir669k-201ENSMUST00000177742 127 ntBASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm22887-201ENSMUST00000178586 107 ntBASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm25673-201ENSMUST00000179957 127 ntBASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Trbv20A0A0B4J1H5 Snord69-201ENSMUST00000104024 80 ntBASIC0.35□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm26076-201ENSMUST00000104065 105 ntBASIC0.35□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm14884-201ENSMUST00000120456 196 ntBASIC0.35□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm6985-201ENSMUST00000121255 271 ntBASIC0.35□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm25976-201ENSMUST00000158695 130 ntBASIC0.35□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm24415-201ENSMUST00000180218 107 ntBASIC0.35□□□□□ -2.35
Trbv20A0A0B4J1H5 Gm26303-201ENSMUST00000116845 119 ntBASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm11388-201ENSMUST00000120908 159 ntBASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25241-201ENSMUST00000174909 84 ntBASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm26217-201ENSMUST00000175212 84 ntBASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm27585-201ENSMUST00000183717 199 ntBASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir3970-201ENSMUST00000199287 90 ntBASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir30a-201ENSMUST00000083471 71 ntBASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.34□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24379-201ENSMUST00000122695 86 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24509-201ENSMUST00000157086 101 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25358-201ENSMUST00000157189 101 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir6389-201ENSMUST00000183661 102 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm6003-201ENSMUST00000187903 463 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm38019-201ENSMUST00000195133 380 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24527-201ENSMUST00000082920 107 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir344-201ENSMUST00000083634 95 ntBASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.32□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25393-201ENSMUST00000157336 285 ntBASIC0.32□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24323-201ENSMUST00000175342 77 ntBASIC0.32□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm26326-201ENSMUST00000083070 129 ntBASIC0.32□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24929-201ENSMUST00000083403 139 ntBASIC0.32□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir146-201ENSMUST00000083667 65 ntBASIC0.32□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir532-201ENSMUST00000093630 96 ntBASIC0.32□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm15289-201ENSMUST00000117793 244 ntBASIC0.31□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25771-201ENSMUST00000158565 144 ntBASIC0.31□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir6394-201ENSMUST00000184738 99 ntBASIC0.31□□□□□ -2.36
Trbv20A0A0B4J1H5 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.31□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm44462-201ENSMUST00000199696 129 ntBASIC0.31□□□□□ -2.36
Trbv20A0A0B4J1H5 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.31□□□□□ -2.36
Trbv20A0A0B4J1H5 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm22706-201ENSMUST00000157907 112 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25901-201ENSMUST00000158494 130 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25935-201ENSMUST00000178746 107 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir8116-201ENSMUST00000184134 97 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir6905-201ENSMUST00000184228 70 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm22358-201ENSMUST00000082877 122 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm23679-201ENSMUST00000083161 119 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm26123-201ENSMUST00000083363 135 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir200b-201ENSMUST00000083615 70 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25188-201ENSMUST00000083913 122 ntBASIC0.3□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm12837-201ENSMUST00000120131 373 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24476-201ENSMUST00000157437 131 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25720-201ENSMUST00000157503 105 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24963-201ENSMUST00000157916 144 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm23838-201ENSMUST00000158067 162 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24549-201ENSMUST00000158647 139 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm22466-201ENSMUST00000175278 69 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm27672-201ENSMUST00000183751 204 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir6985-201ENSMUST00000184641 61 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm42506-201ENSMUST00000202009 150 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24762-201ENSMUST00000083689 104 ntBASIC0.29□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm22469-201ENSMUST00000104118 133 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm23991-201ENSMUST00000117033 93 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm13345-201ENSMUST00000121928 228 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm24594-201ENSMUST00000122502 99 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm26026-201ENSMUST00000122726 123 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm23605-201ENSMUST00000157255 127 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm23672-201ENSMUST00000157471 107 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm25814-201ENSMUST00000082754 107 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Mir384-201ENSMUST00000083565 88 ntBASIC0.28□□□□□ -2.36
Trbv20A0A0B4J1H5 Gm22759-201ENSMUST00000102276 96 ntBASIC0.27□□□□□ -2.37
Trbv20A0A0B4J1H5 Gm25611-201ENSMUST00000104017 133 ntBASIC0.27□□□□□ -2.37
Trbv20A0A0B4J1H5 Gm25274-201ENSMUST00000104296 135 ntBASIC0.27□□□□□ -2.37
Trbv20A0A0B4J1H5 Mir881-201ENSMUST00000104844 78 ntBASIC0.27□□□□□ -2.37
Trbv20A0A0B4J1H5 Gm14883-201ENSMUST00000120179 157 ntBASIC0.27□□□□□ -2.37
Trbv20A0A0B4J1H5 Gm25494-201ENSMUST00000158143 100 ntBASIC0.27□□□□□ -2.37
Trbv20A0A0B4J1H5 Gm24728-201ENSMUST00000158226 125 ntBASIC0.27□□□□□ -2.37
Trbv20A0A0B4J1H5 Gm25464-201ENSMUST00000175481 107 ntBASIC0.27□□□□□ -2.37
Trbv20A0A0B4J1H5 Mir6390-201ENSMUST00000184405 129 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms