Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm23672-201ENSMUST00000157471 107 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm23838-201ENSMUST00000158067 162 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm23763-201ENSMUST00000158345 60 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm23581-201ENSMUST00000158531 63 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm23416-201ENSMUST00000175520 95 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm27747-201ENSMUST00000184707 85 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm25814-201ENSMUST00000082754 107 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm22686-201ENSMUST00000082847 100 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm24764-201ENSMUST00000083686 199 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Mir532-201ENSMUST00000093630 96 ntBASIC0.26□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm25111-201ENSMUST00000116686 147 ntBASIC0.25□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm23466-201ENSMUST00000157133 106 ntBASIC0.25□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm26152-201ENSMUST00000157427 101 ntBASIC0.25□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm24006-201ENSMUST00000158462 132 ntBASIC0.25□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm22434-201ENSMUST00000158549 122 ntBASIC0.25□□□□□ -2.37
Trbv1A0A0B4J1G7 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.25□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.25□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm14906-201ENSMUST00000119265 390 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm13577-201ENSMUST00000121365 205 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm23655-201ENSMUST00000122627 105 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm24509-201ENSMUST00000157086 101 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm25358-201ENSMUST00000157189 101 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm22706-201ENSMUST00000157907 112 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm24728-201ENSMUST00000158226 125 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Mir6985-201ENSMUST00000184641 61 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm44828-201ENSMUST00000203745 106 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm26123-201ENSMUST00000083363 135 ntBASIC0.24□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm22469-201ENSMUST00000104118 133 ntBASIC0.23□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm23989-201ENSMUST00000117030 66 ntBASIC0.23□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm23579-201ENSMUST00000158528 103 ntBASIC0.23□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm37715-201ENSMUST00000193206 235 ntBASIC0.23□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm44373-201ENSMUST00000196112 169 ntBASIC0.23□□□□□ -2.37
Trbv1A0A0B4J1G7 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.23□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm25611-201ENSMUST00000104017 133 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm26293-201ENSMUST00000104170 84 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm22983-201ENSMUST00000158308 104 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm24549-201ENSMUST00000158647 139 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm22466-201ENSMUST00000175278 69 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm25935-201ENSMUST00000178746 107 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Mir6951-201ENSMUST00000183910 75 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm37997-201ENSMUST00000193515 267 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm19572-201ENSMUST00000214326 338 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 AC109214.2-201ENSMUST00000220089 358 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm25135-201ENSMUST00000082648 143 ntBASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Trbv1A0A0B4J1G7 Gm11322-201ENSMUST00000118095 435 ntBASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm13345-201ENSMUST00000121928 228 ntBASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm25300-201ENSMUST00000175284 84 ntBASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm24415-201ENSMUST00000180218 107 ntBASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir6336-201ENSMUST00000183581 130 ntBASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm6003-201ENSMUST00000187903 463 ntBASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm24929-201ENSMUST00000083403 139 ntBASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir344-201ENSMUST00000083634 95 ntBASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.21□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm23321-201ENSMUST00000104465 126 ntBASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669i-201ENSMUST00000117007 127 ntBASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm6952-201ENSMUST00000118629 159 ntBASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm27672-201ENSMUST00000183751 204 ntBASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm45541-201ENSMUST00000210443 54 ntBASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm23969-201ENSMUST00000083324 74 ntBASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm24867-201ENSMUST00000104161 107 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm13339-201ENSMUST00000120651 510 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669k-201ENSMUST00000177742 127 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm25673-201ENSMUST00000179957 127 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm27475-201ENSMUST00000183420 61 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir7010-201ENSMUST00000183464 63 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm27585-201ENSMUST00000183717 199 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir7065-201ENSMUST00000185110 61 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm19790-201ENSMUST00000214414 251 ntBASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.19□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm12837-201ENSMUST00000120131 373 ntBASIC0.18□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm25494-201ENSMUST00000158143 100 ntBASIC0.18□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm3702-201ENSMUST00000211754 346 ntBASIC0.18□□□□□ -2.38
Trbv1A0A0B4J1G7 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.18□□□□□ -2.38
Trbv1A0A0B4J1G7 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.18□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm23451-201ENSMUST00000083328 122 ntBASIC0.18□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.17□□□□□ -2.38
Trbv1A0A0B4J1G7 Gm22999-201ENSMUST00000157082 88 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms