Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm26326-201ENSMUST00000083070 129 ntBASIC0.89□□□□□ -2.27
Trav1A0A075B5Z4 Gm25410-201ENSMUST00000083758 137 ntBASIC0.89□□□□□ -2.27
Trav1A0A075B5Z4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm22233-201ENSMUST00000157464 114 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm24777-201ENSMUST00000157644 107 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm25868-201ENSMUST00000158253 114 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm26360-201ENSMUST00000158872 103 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm16404-201ENSMUST00000177739 468 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm23567-201ENSMUST00000178005 107 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm14598-201ENSMUST00000180109 468 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm14625-201ENSMUST00000180231 468 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Mir7039-201ENSMUST00000183852 85 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Mir7050-201ENSMUST00000184636 60 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Mir3087-201ENSMUST00000199405 56 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm43898-201ENSMUST00000204456 424 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm23245-201ENSMUST00000083370 135 ntBASIC0.88□□□□□ -2.27
Trav1A0A075B5Z4 Gm22551-201ENSMUST00000157795 103 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Gm24808-201ENSMUST00000157993 118 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Gm23209-201ENSMUST00000158667 110 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Snora24-201ENSMUST00000174989 130 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Gm27420-201ENSMUST00000183823 79 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Snord80-202ENSMUST00000199023 77 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Gm25588-201ENSMUST00000082501 140 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Gm22169-201ENSMUST00000083229 107 ntBASIC0.87□□□□□ -2.27
Trav1A0A075B5Z4 Gm22790-201ENSMUST00000157229 129 ntBASIC0.86□□□□□ -2.27
Trav1A0A075B5Z4 Gm22612-201ENSMUST00000158293 101 ntBASIC0.86□□□□□ -2.27
Trav1A0A075B5Z4 Gm22946-201ENSMUST00000158558 82 ntBASIC0.86□□□□□ -2.27
Trav1A0A075B5Z4 Gm25044-201ENSMUST00000158603 104 ntBASIC0.86□□□□□ -2.27
Trav1A0A075B5Z4 Gm27711-201ENSMUST00000183802 118 ntBASIC0.86□□□□□ -2.27
Trav1A0A075B5Z4 Snora41-201ENSMUST00000082668 132 ntBASIC0.86□□□□□ -2.27
Trav1A0A075B5Z4 Gm25851-201ENSMUST00000082794 107 ntBASIC0.86□□□□□ -2.27
Trav1A0A075B5Z4 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trav1A0A075B5Z4 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Mir547-201ENSMUST00000102051 78 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Gm26076-201ENSMUST00000104065 105 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Gm23011-201ENSMUST00000104148 132 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Gm23772-201ENSMUST00000104433 102 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Gm22129-201ENSMUST00000179034 107 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Gm37116-201ENSMUST00000195161 147 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Mir468-201ENSMUST00000197332 78 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Gm44922-201ENSMUST00000206690 90 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Snord47-201ENSMUST00000083034 77 ntBASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav1A0A075B5Z4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav1A0A075B5Z4 Gm22989-201ENSMUST00000158313 86 ntBASIC0.84□□□□□ -2.27
Trav1A0A075B5Z4 Gm22809-201ENSMUST00000082743 156 ntBASIC0.84□□□□□ -2.27
Trav1A0A075B5Z4 Gm23130-201ENSMUST00000104252 74 ntBASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Gm22482-201ENSMUST00000122563 359 ntBASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Gm22944-201ENSMUST00000158662 133 ntBASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Gm23375-201ENSMUST00000175407 83 ntBASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Gm44976-201ENSMUST00000205543 261 ntBASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Mir488-201ENSMUST00000093595 109 ntBASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.83□□□□□ -2.28
Trav1A0A075B5Z4 Gm25882-201ENSMUST00000157784 85 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm23080-201ENSMUST00000157846 103 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm24942-201ENSMUST00000158328 114 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm26403-201ENSMUST00000158500 105 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm25768-201ENSMUST00000158570 98 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm16546-201ENSMUST00000159442 355 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Mir21b-201ENSMUST00000184317 108 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Mir7665-201ENSMUST00000184907 63 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm37997-201ENSMUST00000193515 267 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm42623-201ENSMUST00000197225 379 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Mir6962-201ENSMUST00000199512 63 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm44948-201ENSMUST00000209050 149 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm8219-201ENSMUST00000218309 242 ntBASIC0.82□□□□□ -2.28
Trav1A0A075B5Z4 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm22750-201ENSMUST00000102076 103 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm22337-201ENSMUST00000157721 132 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm25011-201ENSMUST00000158398 126 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Mir1961-201ENSMUST00000158643 112 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm24221-201ENSMUST00000158833 313 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm25364-201ENSMUST00000158851 107 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm16307-201ENSMUST00000161269 210 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm25128-201ENSMUST00000083339 76 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Gm25683-201ENSMUST00000083940 131 ntBASIC0.81□□□□□ -2.28
Trav1A0A075B5Z4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Gm26420-201ENSMUST00000104273 103 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Gm22606-201ENSMUST00000158290 103 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Gm23967-201ENSMUST00000175062 78 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Gm22348-201ENSMUST00000178674 79 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Mir8119-201ENSMUST00000183371 129 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Gm5002-201ENSMUST00000207145 223 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Gm22973-201ENSMUST00000083298 191 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Mir201-201ENSMUST00000083470 66 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Gm22576-201ENSMUST00000083733 104 ntBASIC0.8□□□□□ -2.28
Trav1A0A075B5Z4 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trav1A0A075B5Z4 Mir1298-201ENSMUST00000116681 98 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms